RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 TMEM135Q86UB9 458 aa21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 ANKRD42Q8N9B4 389 aa21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 SPPL3Q8TCT6 385 aa21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 MGARPQ8TDB4 240 aa21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 IMP4Q96G21 291 aaKnown RBP21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 TLR9Q9NR96 1032 aa21.49■■□□□ 1.03
PPP1R3F-203ENST00000466508 MYLKQ15746 1914 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 A0A0D9SEW6 157 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 GMNCA6NCL1 334 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 CSPG5O95196 566 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 ADRA1AP35348 466 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 SGSHP51688 502 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 MPP3Q13368 585 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZNF449Q6P9G9 518 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 UNC5BQ8IZJ1 945 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 HS6ST3Q8IZP7 471 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 ADAMTS19Q8TE59 1207 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 CDKL2Q92772 493 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 FSD1LQ9BXM9 530 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 RABEP2Q9H5N1 569 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 PDFQ9HBH1 243 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 CHD9Q3L8U1 2897 aa21.48■■□□□ 1.03
PPP1R3F-203ENST00000466508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 FAM237BA0A1B0GVD1 139 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 SPAG7O75391 227 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 FAM155BO75949 473 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 KRT37O76014 449 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 USP1O94782 785 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 BMP8BP34820 402 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 CYP4F8P98187 520 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 UBE3AQ05086 875 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 NIPAL4Q0D2K0 466 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 LRRC14Q15048 493 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 LGSNQ5TDP6 509 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 TMCO4Q5TGY1 634 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 MARK2Q7KZI7 788 aaKnown RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 OR52K2Q8NGK3 314 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 SGSM3Q96HU1 749 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZNF599Q96NL3 588 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 C17orf80Q9BSJ5 609 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 FICDQ9BVA6 458 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 CPQQ9Y646 472 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 HELZP42694 1942 aaKnown RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ATP9BO43861 1147 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 TYROBPO43914 113 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 GREM1O60565 184 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 UGT1A9O60656 530 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 PMPCBO75439 489 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 HOXD9P28356 352 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 GBP2P32456 591 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZXDBP98169 803 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 NAB1Q13506 487 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 FRG1Q14331 258 aaKnown RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 LBRQ14739 615 aaKnown RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZSCAN26Q16670 478 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 SETD3Q86TU7 594 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 DYDC1Q8WWB3 177 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZNF669Q96BR6 464 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ALKBH8Q96BT7 664 aaKnown RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 CERS2Q96G23 380 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 MRGPRX2Q96LB1 330 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 FCRL3Q96P31 734 aaPredicted RBP21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 UGT1A7Q9HAW7 530 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 UGT1A10Q9HAW8 530 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 UGT1A8Q9HAW9 530 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 VPS45Q9NRW7 570 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 SOX13Q9UN79 622 aa21.47■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 ILVBLA1L0T0 632 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 C5orf67F2Z3F1 127 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 NDUFAB1O14561 156 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 FAM107AO95990 144 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 MT-ND3P03897 115 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CKMP06732 381 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 SNRPAP09012 282 aaKnown RBP21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 TPH1P17752 444 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CDC25CP30307 473 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CLCN4P51793 760 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 MAXP61244 160 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 ZNF177Q13360 481 aaPredicted RBP21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 DENND5AQ6IQ26 1287 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 KDELC1Q6UW63 502 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CES3Q6UWW8 571 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 Q6ZNB5 142 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CCDC117Q8IWD4 279 aaPredicted RBP21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 MAB21L3Q8N8X9 362 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 OR7D4Q8NG98 312 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 GCNAQ96QF7 691 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 CCT8L2Q96SF2 557 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 ASAH2Q9NR71 780 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 TBC1D30Q9Y2I9 924 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 GBF1Q92538 1859 aa21.46■■□□□ 1.03
PPP1R3F-203ENST00000466508 TSPAN3O60637 253 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 KRT38O76015 456 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 RHOCP08134 193 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 CA4P22748 312 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 SERPINB9P50453 376 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 WNT3AP56704 352 aa21.45■■□□□ 1.02
PPP1R3F-203ENST00000466508 SLC7A9P82251 487 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms