RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 OPHN1O60890 802 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 KRT38O76015 456 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 WFS1O76024 890 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ALDH1A2O94788 518 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 STK10O94804 968 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 METTL18O95568 372 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ATP6V1G2O95670 118 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 F11P03951 625 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 APRTP07741 180 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CEBPBP17676 345 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GABRR2P28476 465 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 WEE1P30291 646 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CDC25CP30307 473 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GRIK1P39086 918 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 HCAR3P49019 387 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SCAPQ12770 1279 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PRKD1Q15139 912 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 STXBP5Q5T5C0 1151 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 OTUD1Q5VV17 481 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PAQR9Q6ZVX9 377 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 BMP8AQ7Z5Y6 402 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CCDC185Q8N715 623 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 CCDC110Q8TBZ0 833 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 HTR3CQ8WXA8 447 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SPOCK2Q92563 424 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 PGAP3Q96FM1 320 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TRMT2BQ96GJ1 504 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SERAC1Q96JX3 654 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 C8orf48Q96LL4 319 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 RAB3IPQ96QF0 476 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 LRMDAQ9H2I8 198 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ATXN3LQ9H3M9 355 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 MANSC1Q9H8J5 431 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TRPV4Q9HBA0 871 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ZNF334Q9HCZ1 680 aaPredicted RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 ZMYM5Q9UJ78 669 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 DUSP12Q9UNI6 340 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 RPL26L1Q9UNX3 145 aaKnown RBP10.12□□□□□ -0.79
PTPRD-207ENST00000463477 NUMBLQ9Y6R0 609 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 TECTAO75443 2155 aa10.12□□□□□ -0.79
PTPRD-207ENST00000463477 SLC38A8A6NNN8 435 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 PRR33A8MZF0 331 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 AVILO75366 819 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ECI2O75521 394 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 GJA1P17302 382 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 GPR15P49685 360 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 SULT1E1P49888 294 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 RASSF2P50749 326 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ADIGQ0VDE8 80 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 PDK1Q15118 436 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TEAD2Q15562 447 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TMEM31Q5JXX7 168 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ANKRD20A2Q5SQ80 823 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 WLSQ5T9L3 541 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ANKRD20A1Q5TYW2 823 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ANKRD20A3Q5VUR7 823 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 UNC5AQ6ZN44 842 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 CLEC20AQ6ZU45 233 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 MARK2Q7KZI7 788 aaKnown RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TBC1D1Q86TI0 1168 aaPredicted RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 PRPF39Q86UA1 669 aaKnown RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 SCN4BQ8IWT1 228 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TAB3Q8N5C8 712 aaPredicted RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ACMSDQ8TDX5 336 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 MRRFQ96E11 262 aaKnown RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ASIC4Q96FT7 647 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ZSWIM3Q96MP5 696 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TUBB6Q9BUF5 446 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 RPP25Q9BUL9 199 aaKnown RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 MYLK2Q9H1R3 596 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 ZFP14Q9HCL3 533 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 MOCS1Q9NZB8 636 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 SLC17A7Q9P2U7 560 aa10.11□□□□□ -0.79
PTPRD-207ENST00000463477 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
PTPRD-207ENST00000463477 TRIM49D1C9J1S8 452 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 COPEO14579 308 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 DNAJC6O75061 913 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 RFPL1O75677 317 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 FAM200BP0CF97 657 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 PYGBP11216 843 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 SRFP11831 508 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 VAV1P15498 845 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 GOT1P17174 413 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 AMPD1P23109 780 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 ATXN1P54253 815 aaKnown RBP10.1□□□□□ -0.79
PTPRD-207ENST00000463477 DPYSQ14117 519 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 FRG1Q14331 258 aaKnown RBP10.1□□□□□ -0.79
PTPRD-207ENST00000463477 RAB41Q5JT25 222 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 FAM78AQ5JUQ0 283 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TANGO2Q6ICL3 276 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 LRRC8BQ6P9F7 803 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 DENND5BQ6ZUT9 1274 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TMEM150AQ86TG1 271 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms