RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LGI2Q8N0V4 545 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR14C36Q8NHC7 312 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SNIP1Q8TAD8 396 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 RFFLQ8WZ73 363 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 NT5C3BQ969T7 300 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 C18orf8Q96DM3 657 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SERAC1Q96JX3 654 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 NPY6RQ99463 290 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 PRMT1Q99873 361 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 OMDQ99983 421 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 DDX50Q9BQ39 737 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TRIM62Q9BVG3 475 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 CAAP1Q9H8G2 361 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ERVMER34-1Q9H9K5 563 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ANLNQ9NQW6 1124 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TMEM59LQ9UK28 342 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SARDHQ9UL12 918 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 MYO6Q9UM54 1294 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 RAI2Q9Y5P3 530 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TCRBV5S1A1TA0A578 114 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 LRRC53A6NM62 1247 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 CAPN9O14815 690 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 ATXN7O15265 892 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PLRG1O43660 514 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 BRINP1O60477 761 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 RTN2O75298 545 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 SERPINC1P01008 464 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 JUPP14923 745 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PDGFRAP16234 1089 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 NOS2P35228 1153 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 ARRB1P49407 418 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PLK1P53350 603 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 CDK17Q00537 523 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 INSM1Q01101 510 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 SEMG2Q02383 582 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 ELAVL3Q14576 367 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 FILIP1LQ4L180 1135 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 FIGNQ5HY92 759 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 FAM102AQ5T9C2 384 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PCSK4Q6UW60 755 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 TRIM72Q6ZMU5 477 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 MON1BQ7L1V2 547 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 TRIM69Q86WT6 500 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 CHSY1Q86X52 802 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 CCAR2Q8N163 923 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR52K2Q8NGK3 314 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC30A5Q8TAD4 765 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 ALG14Q96F25 216 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PGAP3Q96FM1 320 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 BTN2A3PQ96KV6 586 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBCBQ99426 244 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 C11orf70Q9BRQ4 267 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 NRSN2Q9GZP1 204 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PDCL3Q9H2J4 239 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 SYNCQ9H7C4 482 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 METTL5Q9NRN9 209 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 PIGVQ9NUD9 493 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 DDIT4Q9NX09 232 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 TAS2R14Q9NYV8 317 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 CA5BQ9Y2D0 317 aa8.13□□□□□ -1.11
CDC42BPA-210ENST00000462553 ANKRD36A6QL64 1941 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SYNJ2BP-COX16A0A087WUM0 186 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 C2CD4BA6NLJ0 364 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 GOLGA8SH3BPF8 625 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNF103O00237 685 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TRIM38O00635 465 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC7A4O43246 635 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SDC3O75056 442 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 MOCS3O95396 460 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ADCY5O95622 1261 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 IL1BP01584 269 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 APOEP02649 317 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 GIMD1P0DJR0 217 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 CDK4P11802 303 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 FERP16591 822 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ACP1P24666 158 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 MAT2AP31153 395 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 GGCXP38435 758 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 PRKCIP41743 596 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SULT1E1P49888 294 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 UBASH3AP57075 661 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TAS2R38P59533 333 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 CNTN1Q12860 1018 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ILKQ13418 452 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 RAB6CQ53S08 254 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ARCQ7LC44 396 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF571Q7Z3V5 609 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 PHLDB2Q86SQ0 1253 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 IQCHQ86VS3 1027 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 DNAAF5Q86Y56 855 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 OXR1Q8N573 874 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 EMC1Q8N766 993 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ATP6V0D2Q8N8Y2 350 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms