RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 CD93Q9NPY3 652 aa18.76■□□□□ 0.59
DDR1-241ENST00000460944 DDX56Q9NY93 547 aaKnown RBP18.76■□□□□ 0.59
DDR1-241ENST00000460944 MBD1Q9UIS9 605 aaPredicted RBP18.76■□□□□ 0.59
DDR1-241ENST00000460944 MYO15AQ9UKN7 3530 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 LRRD1A4D1F6 860 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 BTNL10A8MVZ5 291 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 MID1O15344 667 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 PJA2O43164 708 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 KRT1P04264 644 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 CD48P09326 243 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 TNNT1P13805 278 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 SLC8A1P32418 973 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 DHPSP49366 369 aaPredicted RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 PAPOLAP51003 745 aaKnown RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 ARSEP51690 589 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 KIF5AQ12840 1032 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 MMRN1Q13201 1228 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 INO80DQ53TQ3 878 aaPredicted RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 SPDYCQ5MJ68 293 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 AFMIDQ63HM1 303 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 LEKR1Q6ZMV7 388 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 USP30Q70CQ3 517 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 DAAM2Q86T65 1068 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 FAM124AQ86V42 546 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 ALYREFQ86V81 257 aaKnown RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 NPWQ8N729 165 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 ISG20Q96AZ6 181 aaKnown RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 TOE1Q96GM8 510 aaKnown RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 OMDQ99983 421 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 KLC2Q9H0B6 622 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 FBXL12Q9NXK8 326 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 WSB2Q9NYS7 404 aaPredicted RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 UBA2Q9UBT2 640 aaPredicted RBP18.75■□□□□ 0.59
DDR1-241ENST00000460944 HYOU1Q9Y4L1 999 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 ACTL7AQ9Y615 435 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 ALG6Q9Y672 507 aa18.75■□□□□ 0.59
DDR1-241ENST00000460944 SHROOM3Q8TF72 1996 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 RCCD1A6NED2 376 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 ARHGAP6O43182 974 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 PSTPIP1O43586 416 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 PRAMEF11O60813 436 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 TMCC1O94876 653 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 EPN2O95208 641 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 CD160O95971 181 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 PRNPP04156 253 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 C5AR1P21730 350 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 KDELR1P24390 212 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 CHRNA3P32297 505 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 IFI16Q16666 785 aaKnown RBP18.74■□□□□ 0.59
DDR1-241ENST00000460944 CARD16Q5EG05 197 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 ARHGAP12Q8IWW6 846 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 TMEFF1Q8IYR6 380 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 RYBPQ8N488 228 aaPredicted RBP18.74■□□□□ 0.59
DDR1-241ENST00000460944 OR2A12Q8NGT7 310 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 TPCN2Q8NHX9 752 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 PIP4K2CQ8TBX8 421 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 TM6SF2Q9BZW4 377 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 BTBD1Q9H0C5 482 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 ETNK2Q9NVF9 386 aa18.74■□□□□ 0.59
DDR1-241ENST00000460944 A0A1W2PP55 124 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 RNASEH2AO75792 299 aaKnown RBP18.73■□□□□ 0.59
DDR1-241ENST00000460944 GSRP00390 522 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 IL4RP24394 825 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 RHOAP61586 193 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 SNRPD1P62314 119 aaKnown RBP18.73■□□□□ 0.59
DDR1-241ENST00000460944 ANKRD20A8PQ5CZ79 823 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 LYSMD4Q5XG99 296 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 DPY19L3Q6ZPD9 716 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 ARMCX6Q7L4S7 300 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 CYP2U1Q7Z449 544 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.73■□□□□ 0.59
DDR1-241ENST00000460944 RAPGEF5Q92565 580 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 FOXJ1Q92949 421 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 FAF2Q96CS3 445 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 GPR174Q9BXC1 333 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 LACRTQ9GZZ8 138 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 SGK2Q9HBY8 427 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 IL36AQ9UHA7 158 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 IPO11Q9UI26 975 aaKnown RBP18.73■□□□□ 0.59
DDR1-241ENST00000460944 PPM1HQ9ULR3 514 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDR1-241ENST00000460944 MFHAS1Q9Y4C4 1052 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 PCDHGA5Q9Y5G8 931 aa18.73■□□□□ 0.59
DDR1-241ENST00000460944 DMDP11532 3685 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 GVINP1Q7Z2Y8 2422 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 J3KR12 359 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 IGSF6O95976 241 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 PI4KAP42356 2102 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 DPP6P42658 865 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 CCNHP51946 323 aaPredicted RBP18.72■□□□□ 0.59
DDR1-241ENST00000460944 CREB5Q02930 508 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 IL10RBQ08334 325 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 VSIG1Q86XK7 387 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 LRRC8AQ8IWT6 810 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 PLPP6Q8IY26 295 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 HDDC3Q8N4P3 179 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 ATPAF2Q8N5M1 289 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 NETO2Q8NC67 525 aa18.72■□□□□ 0.59
DDR1-241ENST00000460944 CHST14Q8NCH0 376 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms