RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 PIP4K2CQ8TBX8 421 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 ZNF564Q8TBZ8 553 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-207ENST00000435455 KCTD15Q96SI1 283 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-207ENST00000435455 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 NEUROG2Q9H2A3 272 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 NOL6Q9H6R4 1146 aaKnown RBP16.59■□□□□ 0.25
SMPD4-207ENST00000435455 RXFP3Q9NSD7 469 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 CTTNBP2NLQ9P2B4 639 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 SERGEFQ9UGK8 458 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 LCMT1Q9UIC8 334 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 DCHS1Q96JQ0 3298 aa16.59■□□□□ 0.25
SMPD4-207ENST00000435455 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.25
SMPD4-207ENST00000435455 A0A1B0GTW7 788 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 RASA4BC9J798 803 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 RASA4O43374 803 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 KDELR3O43731 214 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 CHRNA3P32297 505 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 DRD3P35462 400 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 HCAR3P49019 387 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 CCDC15Q0P6D6 951 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 SERINC3Q13530 473 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 PPP6R3Q5H9R7 873 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-207ENST00000435455 PLPP6Q8IY26 295 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 TEKT4Q8WW24 435 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 CASKIN2Q8WXE0 1202 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 SNX19Q92543 992 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 MRFAP1L1Q96HT8 127 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 CHP1Q99653 195 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 TNKS2Q9H2K2 1166 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 ZWILCHQ9H900 591 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 NHEJ1Q9H9Q4 299 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-207ENST00000435455 CAPN10Q9HC96 672 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 TMEM9BQ9NQ34 198 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 EIF2B4Q9UI10 523 aaKnown RBP16.58■□□□□ 0.24
SMPD4-207ENST00000435455 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
SMPD4-207ENST00000435455 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
SMPD4-207ENST00000435455 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-207ENST00000435455 ADAMTS9Q9P2N4 1935 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 SLC7A4O43246 635 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 FSBPO95073 299 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 SYPP08247 313 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 TMEM253P0C7T8 217 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 MAOBP27338 520 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 IL1R2P27930 398 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 ARL4AP40617 200 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 DNA2P51530 1060 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 ZNF75DP51815 510 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 NDST2P52849 883 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 DPYSL2Q16555 572 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 HADHQ16836 314 aaKnown RBP16.57■□□□□ 0.24
SMPD4-207ENST00000435455 CARD16Q5EG05 197 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 DAB2IPQ5VWQ8 1189 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 KIAA0895LQ68EN5 471 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 NCEH1Q6PIU2 408 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-207ENST00000435455 RFX8Q6ZV50 586 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 OR14C36Q8NHC7 312 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 FAM131CQ96AQ9 280 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 HMCESQ96FZ2 354 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 BTBD6Q96KE9 485 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 MIR1-1HGQ9H1L0 117 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 KDM4CQ9H3R0 1056 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 DYRK4Q9NR20 520 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 IL36AQ9UHA7 158 aa16.57■□□□□ 0.24
SMPD4-207ENST00000435455 FCF1Q9Y324 198 aaKnown RBP16.57■□□□□ 0.24
SMPD4-207ENST00000435455 KNL1Q8NG31 2342 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 FAM47DPA6NHR8 397 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ARHGAP42A6NI28 874 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 H3BRJ5 948 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 BCAT2O15382 392 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 BUB1O43683 1085 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ZNF821O75541 412 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CD160O95971 181 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ENGP17813 658 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ERCC2P18074 760 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CD27P26842 260 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CCR5P51681 352 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ATXN3P54252 364 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ADPRHP54922 357 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CNTN1Q12860 1018 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 SMTNL2Q2TAL5 461 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 INO80DQ53TQ3 878 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 DPY19L3Q6ZPD9 716 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ZCCHC9Q8N567 271 aaKnown RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CHST14Q8NCH0 376 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 BIRC7Q96CA5 298 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 PPP1R16AQ96I34 528 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 HEPHQ9BQS7 1158 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 PACSIN1Q9BY11 444 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 ZDHHC5Q9C0B5 715 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 LRRC19Q9H756 370 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 SPTLC3Q9NUV7 552 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 CWC15Q9P013 229 aaKnown RBP16.56■□□□□ 0.24
SMPD4-207ENST00000435455 PCDH15Q96QU1 1955 aa16.56■□□□□ 0.24
SMPD4-207ENST00000435455 SPTBN2O15020 2390 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 ARHGAP33O14559 1287 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 PLRG1O43660 514 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms