RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LMAN2LQ9H0V9 348 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 MROH8Q9H579 483 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 NLKQ9UBE8 527 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 HSF4Q9ULV5 492 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 CRYL1Q9Y2S2 319 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 BICRAQ9NZM4 1560 aa4.1□□□□□ -1.75
HMGB1P11-201ENST00000413899 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMEM272A0A1B0GTI8 110 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 SERPINC1P01008 464 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 IFIT1P09914 478 aaKnown RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 PGM1P36871 562 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 MAPK7Q13164 816 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 BAK1Q16611 211 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 SYTL3Q4VX76 610 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 Q5PR19 223 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 INTS11Q5TA45 600 aaKnown RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 HMBOX1Q6NT76 420 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 C17orf99Q6UX52 265 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 MMS22LQ6ZRQ5 1243 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 TRAPPC11Q7Z392 1133 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMC8Q8IU68 726 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF366Q8N895 744 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 CMASQ8NFW8 434 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZCCHC10Q8TBK6 192 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 TMEM170AQ8WVE7 144 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 HSPH1Q92598 858 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 CNOT9Q92600 299 aaKnown RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF333Q96JL9 665 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 B3GNT4Q9C0J1 378 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 EPHX3Q9H6B9 360 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 POT1Q9NUX5 634 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 BEX4Q9NWD9 120 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 ALKBH4Q9NXW9 302 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 RNF7Q9UBF6 113 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 SEL1LQ9UBV2 794 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 SLC25A10Q9UBX3 287 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 CNOT7Q9UIV1 285 aaKnown RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 CNPY2Q9Y2B0 182 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 ZNF521Q96K83 1311 aa4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 EIF4G1Q04637 1599 aaKnown RBP4.09□□□□□ -1.75
HMGB1P11-201ENST00000413899 C17orf113A0A1B0GUU1 675 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 TARSL2A2RTX5 802 aaKnown RBP4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 GAGE10A6NGK3 116 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 FAM157AC9JC47 383 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 PER2O15055 1255 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 ZC3H11AO75152 810 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 ADAP00813 363 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 XBP1P17861 261 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 YWHAQP27348 245 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 PTPN9P43378 593 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 BLKP51451 505 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 POU5F1BQ06416 359 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 PRICKLE4Q2TBC4 344 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 LEXMQ3ZCV2 418 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 PIM3Q86V86 326 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 CAMK1DQ8IU85 385 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 ESX1Q8N693 406 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 TSPYL6Q8N831 410 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 ZMIZ2Q8NF64 920 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 TNIP2Q8NFZ5 429 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 OR4N2Q8NGD1 307 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 INPP5DQ92835 1189 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 HVCN1Q96D96 273 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 ELP4Q96EB1 424 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 FCRL4Q96PJ5 515 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 EYA3Q99504 573 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 POLR3GLQ9BT43 218 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 CHMP4AQ9BY43 222 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 INTS2Q9H0H0 1204 aaKnown RBP4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 FOXP1Q9H334 677 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 KLHL31Q9H511 634 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 CXorf56Q9H5V9 222 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 PPP1R14DQ9NXH3 145 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 HCN3Q9P1Z3 774 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 TBC1D14Q9P2M4 693 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 TMEM98Q9Y2Y6 226 aa4.08□□□□□ -1.76
HMGB1P11-201ENST00000413899 POLR2AP24928 1970 aaKnown RBP4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 HSPB6O14558 160 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 SPTLC2O15270 562 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 CBX6O95503 412 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 TOMM40O96008 361 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 MMP3P08254 477 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 HNRNPA1P09651 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 PSG1P11464 419 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 DPP6P42658 865 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 POLD2P49005 469 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 CENPAP49450 140 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 SLC18A2Q05940 514 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 CAMK1Q14012 370 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 NFIL3Q16649 462 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 ME3Q16798 604 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 ZNF766Q5HY98 468 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 NUGGCQ68CJ6 796 aa4.07□□□□□ -1.76
HMGB1P11-201ENST00000413899 NCAPH2Q6IBW4 605 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms