RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 PPP1R12AO14974 1030 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 EIF3HO15372 352 aaKnown RBP eCLIP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 MFSD11O43934 449 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GCATO75600 419 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TTC4O95801 387 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GOLGA6DP0CG33 693 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 RBL1P28749 1068 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 HLA-FP30511 346 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CD70P32970 193 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 SERPINB6P35237 376 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 OPRD1P41143 372 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 NUMBP49757 651 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GBE1Q04446 702 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 ZNF844Q08AG5 666 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 LMAN2Q12907 356 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 SLC29A2Q14542 456 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TJAP1Q5JTD0 557 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 IER5LQ5T953 404 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 RNF219Q5W0B1 726 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 HEATR6Q6AI08 1181 aaKnown RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 PPP1R21Q6ZMI0 780 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TTC25Q96NG3 672 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 RBM15Q96T37 977 aaKnown RBP eCLIP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TMEM109Q9BVC6 243 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 EPB41L4BQ9H329 900 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CDC42EP4Q9H3Q1 356 aaKnown RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 C10orf88Q9H8K7 445 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TMBIM4Q9HC24 238 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GOLGA6AQ9NYA3 693 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 C5orf60A6NFR6 353 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 SPECC1L-ADORA2AF8WAN1 911 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 RAMP2O60895 175 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 MAP3K6O95382 1288 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CISD3P0C7P0 127 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CSKP41240 450 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 DGKGP49619 791 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 GNA12Q03113 381 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 SLC10A2Q12908 348 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CENPUQ71F23 418 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 TP53INP2Q8IXH6 220 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CCDC33Q8N5R6 958 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 LZTR1Q8N653 840 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 ZNF557Q8N988 423 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 CPT1BQ92523 772 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 PRCCQ92733 491 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 LMLNQ96KR4 655 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 ROPN1BQ9BZX4 212 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 SLC39A8Q9C0K1 460 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 ROPN1Q9HAT0 212 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 KIAA1522Q9P206 1035 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-202ENST00000413636 DEC1Q9P2X7 70 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 PIAS3Q9Y6X2 628 aa18.96■□□□□ 0.63
CIRBP-202ENST00000413636 A0A0D9SEW6 157 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 ILVBLA1L0T0 632 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 STK10O94804 968 aaKnown RBP18.95■□□□□ 0.62
CIRBP-202ENST00000413636 MZF1P28698 734 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-202ENST00000413636 CTHP32929 405 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 NDST2P52849 883 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 ARL4CP56559 192 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 KDSRQ06136 332 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 MESP2Q0VG99 397 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 POLD3Q15054 466 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-202ENST00000413636 AGBL2Q5U5Z8 902 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 AFMIDQ63HM1 303 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 GRAMD4Q6IC98 578 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 ARHGAP12Q8IWW6 846 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 NAT8LQ8N9F0 302 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 OR7D4Q8NG98 312 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 MUC3BQ9H195 1237 aa18.95■□□□□ 0.62
CIRBP-202ENST00000413636 C8orf33Q9H7E9 229 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-202ENST00000413636 NYNRINQ9P2P1 1898 aaKnown RBP18.95■□□□□ 0.62
CIRBP-202ENST00000413636 RASA4BC9J798 803 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 RASA4O43374 803 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 MX2P20592 715 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 EIF2DP41214 584 aaKnown RBP18.94■□□□□ 0.62
CIRBP-202ENST00000413636 MAGEA4P43358 317 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 OXCT1P55809 520 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 YBEYP58557 167 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-202ENST00000413636 SLC44A4Q53GD3 710 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 ZNF783Q6ZMS7 281 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 RALGPS2Q86X27 583 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-202ENST00000413636 APCDD1Q8J025 514 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 FAM76AQ8TAV0 307 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 HTR3CQ8WXA8 447 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 ARHGEF2Q92974 986 aaKnown RBP18.94■□□□□ 0.62
CIRBP-202ENST00000413636 HMCESQ96FZ2 354 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 ATP6V1G3Q96LB4 118 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 CCDC77Q9BR77 488 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 FEM1AQ9BSK4 669 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 MAGEH1Q9H213 219 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 MUTYHQ9UIF7 546 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 GGA2Q9UJY4 613 aa18.94■□□□□ 0.62
CIRBP-202ENST00000413636 DFFAO00273 331 aa18.93■□□□□ 0.62
CIRBP-202ENST00000413636 PABPC1P11940 636 aaKnown RBP18.93■□□□□ 0.62
CIRBP-202ENST00000413636 ACVRL1P37023 503 aa18.93■□□□□ 0.62
CIRBP-202ENST00000413636 BASP1P80723 227 aaKnown RBP18.93■□□□□ 0.62
CIRBP-202ENST00000413636 CBLBQ13191 982 aa18.93■□□□□ 0.62
CIRBP-202ENST00000413636 HIF1AQ16665 826 aa18.93■□□□□ 0.62
CIRBP-202ENST00000413636 GEN1Q17RS7 908 aa18.93■□□□□ 0.62
CIRBP-202ENST00000413636 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms