RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MTF2Q9Y483 593 aaPredicted RBP5.56□□□□□ -1.52
LINC00342-201ENST00000412393 CEP83Q9Y592 693 aa5.56□□□□□ -1.52
LINC00342-201ENST00000412393 RIF1Q5UIP0 2472 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SPAG17Q6Q759 2223 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MYBPHLA2RUH7 354 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PRR23AA6NEV1 266 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SLC38A8A6NNN8 435 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 EBAG9O00559 213 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PDXKO00764 312 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 AURKAO14965 403 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PRAMEF12O95522 483 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CYP1A1P04798 512 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 RPN1P04843 607 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MYL1P05976 194 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PDGFRBP09619 1106 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FAM163BP0C2L3 166 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SP9P0CG40 484 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF28P17035 718 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 HMGA1P17096 107 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CYP2F1P24903 491 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 LMO2P25791 158 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 ARHGAP25P42331 645 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MAGEA11P43364 429 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CASP4P49662 377 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 KPNA1P52294 538 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 AP3M2P53677 418 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PSMC1P62191 440 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 VSNL1P62760 191 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 TNNC1P63316 161 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 APBA1Q02410 837 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FCHO2Q0JRZ9 810 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 BIRC3Q13489 604 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MAPRE1Q15691 268 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 WDR72Q3MJ13 1102 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CFAP221Q4G0U5 840 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SDHAF4Q5VUM1 108 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FAM171BQ6P995 826 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF852Q6ZMS4 543 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 C4orf50Q6ZRC1 276 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 TOGARAM2Q6ZUX3 1019 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 ASCL5Q7RTU5 278 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CMTM8Q8IZV2 173 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MMGT1Q8N4V1 131 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CELF5Q8N6W0 485 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MAB21L3Q8N8X9 362 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 STKLD1Q8NE28 680 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 OR6B3Q8NGW1 331 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PLEKHO2Q8TD55 490 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 BPIFB1Q8TDL5 484 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FAM3CQ92520 227 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MRPS31Q92665 395 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MYLPFQ96A32 169 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CLDN23Q96B33 292 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 LRRC3BQ96PB8 259 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 TM9SF2Q99805 663 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MRPL45Q9BRJ2 306 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SLC46A2Q9BY10 475 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SNX25Q9H3E2 840 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 C8orf33Q9H7E9 229 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 DMAC2Q9NW81 257 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 OBP2AQ9NY56 170 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 UXTQ9UBK9 157 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 VTI1BQ9UEU0 232 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 ING1Q9UK53 422 aaPredicted RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 FBXO4Q9UKT5 387 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 CDH9Q9ULB4 789 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MYO6Q9UM54 1294 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 NDRG2Q9UN36 371 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 PIAS3Q9Y6X2 628 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 R4GN57 208 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 MYO18AQ92614 2054 aaKnown RBP5.55□□□□□ -1.52
LINC00342-201ENST00000412393 KIAA1549LQ6ZVL6 1849 aa5.55□□□□□ -1.52
LINC00342-201ENST00000412393 SHISA7A6NL88 538 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 LRRIQ3A6PVS8 624 aaPredicted RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 GOLGA8KD6RF30 607 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 SPECC1L-ADORA2AF8WAN1 911 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 AGPSO00116 658 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ARNTLO00327 626 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 CALUO43852 315 aaPredicted RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MFAP3LO75121 409 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TACC1O75410 805 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 NOL4O94818 638 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 RHOBTB3O94955 611 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 C4BPAP04003 597 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 NR3C1P04150 777 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 BDNFP23560 247 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 CCNE1P24864 410 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 DDX6P26196 483 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ANXA13P27216 316 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ATICP31939 592 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 HNRNPH1P31943 449 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 GNL1P36915 607 aaPredicted RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 AVPR1AP37288 418 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 SSR1P43307 286 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 RPS9P46781 194 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 SOX9P48436 509 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms