RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DLG2Q15700 870 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 HEATR6Q6AI08 1181 aaKnown RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 SERPINA13PQ6UXR4 307 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 ALLCQ8N6M5 410 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 PJA1Q8NG27 643 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 HTR3CQ8WXA8 447 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 MAML1Q92585 1016 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 FATE1Q969F0 183 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 NKD2Q969F2 451 aaPredicted RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 TMEM121Q9BTD3 319 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 CEP41Q9BYV8 373 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 GOLGA6L10A0A0M3HER8 536 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 WASP42768 502 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 MRPS21P82921 87 aaKnown RBP33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 HNRNPDQ14103 355 aaKnown RBP33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 LRRC32Q14392 662 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 CYTH1Q15438 398 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 MARC1Q5VT66 337 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 Q6ZS52 159 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 IL17RCQ8NAC3 791 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 RPLP0P6Q8NHW5 317 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 KCNV2Q8TDN2 545 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 MAGOHBQ96A72 148 aaKnown RBP33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 ZNF419Q96HQ0 510 aaPredicted RBP33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 ZNF148Q9UQR1 794 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 MRFAP1Q9Y605 127 aa33.88■■■■□ 3.01
CSNK1E-204ENST00000403904 BCLAF3A2AJT9 711 aaKnown RBP33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 ATP9BO43861 1147 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 JCHAINP01591 159 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 HLA-EP13747 358 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 KCNJ1P48048 391 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 VASPP50552 380 aaPredicted RBP33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 RFTN1Q14699 578 aaPredicted RBP33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 KDM1BQ8NB78 822 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 CCDC26Q8TAB7 109 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 CASKIN2Q8WXE0 1202 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 TMEM245Q9H330 911 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 MTG2Q9H4K7 406 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 USP29Q9HBJ7 922 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 STON1Q9Y6Q2 735 aa33.87■■■■□ 3.01
CSNK1E-204ENST00000403904 KCNN4O15554 427 aa33.86■■■■□ 3.01
CSNK1E-204ENST00000403904 RENBPP51606 427 aa33.86■■■■□ 3.01
CSNK1E-204ENST00000403904 ZBTB17Q13105 803 aa33.86■■■■□ 3.01
CSNK1E-204ENST00000403904 CYP1B1Q16678 543 aa33.86■■■■□ 3.01
CSNK1E-204ENST00000403904 DRICH1Q6PGQ1 229 aaPredicted RBP33.86■■■■□ 3.01
CSNK1E-204ENST00000403904 ZNF821O75541 412 aaPredicted RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 KLF8O95600 359 aaPredicted RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 PRKCHP24723 683 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 MMP13P45452 471 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 NRLP54845 237 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 IFI35P80217 286 aaPredicted RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 E2F5Q15329 346 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 C22orf39Q6P5X5 142 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 CCDC105Q8IYK2 499 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 SYNPOQ8N3V7 929 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TEX26Q8N6G2 289 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 C12orf50Q8NA57 414 aaPredicted RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TXNDC5Q8NBS9 432 aaKnown RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TSEN2Q8NCE0 465 aaKnown RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 FRS2Q8WU20 508 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 CINPQ9BW66 212 aaPredicted RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 OSBPL6Q9BZF3 934 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TNKS2Q9H2K2 1166 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 RBM22Q9NW64 420 aaKnown RBP eCLIP33.85■■■■□ 3.012e-6■□□□□ 9.4
CSNK1E-204ENST00000403904 SIT1Q9Y3P8 196 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 NPC1O15118 1278 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 NTSR1P30989 418 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 WASHC5Q12768 1159 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 ENPP2Q13822 863 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TUBB2AQ13885 445 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 ZNF235Q14590 738 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 WHAMMP3Q1A5X7 153 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TTC27Q6P3X3 843 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 PKN3Q6P5Z2 889 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 METTL3Q86U44 580 aaKnown RBP33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 FAM71DQ8N9W8 422 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 IL12RB2Q99665 862 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TUBB2BQ9BVA1 445 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 SEPT3Q9UH03 358 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 SLC8A2Q9UPR5 921 aa33.85■■■■□ 3.01
CSNK1E-204ENST00000403904 TMEM221A6NGB7 291 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 M0R296 226 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 MTSS1O43312 755 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 PHF2O75151 1096 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 ITGAVP06756 1048 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 PTPN3P26045 913 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 RHOAP61586 193 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 Q6ZVU0 165 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 EXOC2Q96KP1 924 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 TM6SF2Q9BZW4 377 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 CEP44Q9C0F1 390 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 NT5MQ9NPB1 228 aa33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 DRG1Q9Y295 367 aaKnown RBP33.84■■■■□ 3.01
CSNK1E-204ENST00000403904 RNF103O00237 685 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 MUSKO15146 869 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 BNIP3LO60238 219 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 ADAM23O75077 832 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 GDF10P55107 478 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 SDE2Q6IQ49 451 aa33.83■■■■□ 3.01
CSNK1E-204ENST00000403904 TRMT11Q7Z4G4 463 aaKnown RBP33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms