RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 A0A087X1B8 175 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 TMCC1O94876 653 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 CTSHP09668 335 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 VAV1P15498 845 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ARPP19P56211 112 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 NEPROQ6NW34 567 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 LZTR1Q8N653 840 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ADCY4Q8NFM4 1077 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 TUBGCP3Q96CW5 907 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 SMARCD1Q96GM5 515 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 CCDC106Q9BWC9 280 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 FZD10Q9ULW2 581 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ORC6Q9Y5N6 252 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 TCRBV5S1A1TA0A578 114 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 THP07101 528 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 PLK1P53350 603 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 MSLNQ13421 630 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ARL13AQ5H913 290 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 FAM91A1Q658Y4 838 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 CYP2R1Q6VVX0 501 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 SENP8Q96LD8 212 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 NFKBIZQ9BYH8 718 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ATXN3LQ9H3M9 355 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 KCNK13Q9HB14 408 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 NR5A2O00482 541 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 B3GAT3O94766 335 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.514e-11■■□□□ 14.1
UBE2D3-209ENST00000394804 MSX2P35548 267 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 GLUD2P49448 558 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 PCBP1Q15365 356 aaKnown RBP eCLIP11.84□□□□□ -0.519e-7■□□□□ 10.8
UBE2D3-209ENST00000394804 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 SLC5A9Q2M3M2 681 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 TEX44Q53QW1 395 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 DHFR2Q86XF0 187 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 AZIN2Q96A70 460 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 RTP4Q96DX8 246 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 RMND5BQ96G75 393 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 NDNQ99608 321 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 OMDQ99983 421 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 MRPS26Q9BYN8 205 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 BAG5Q9UL15 447 aa11.84□□□□□ -0.51
UBE2D3-209ENST00000394804 SCN9AQ15858 1988 aa11.83□□□□□ -0.51
UBE2D3-209ENST00000394804 SUPT3HB4E1H0 165 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 SUPT3HO75486 399 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 USP2O75604 605 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 FGFR1P11362 822 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 FGF3P11487 239 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 TFEBP19484 476 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 EPHX2P34913 555 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 KCNK10P57789 538 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 PCLAFQ15004 111 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 NRF1Q16656 503 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 AASDHQ4L235 1098 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 GPR141Q7Z602 305 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 PGAM4Q8N0Y7 254 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 MRPL57Q9BQC6 102 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CHRAC1Q9NRG0 131 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CCNT2O60583 730 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 ITGAXP20702 1163 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CTBP1Q13363 440 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 GRM3Q14832 879 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CCL15Q16663 113 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 MRNIPQ6NTE8 343 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 ZYG11AQ6WRX3 759 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 RBM44Q6ZP01 1051 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 SNX27Q96L92 541 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 GBA3Q9H227 469 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 WARS2Q9UGM6 360 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 LZTS1Q9Y250 596 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 MYRFQ9Y2G1 1151 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 C17orf102A2RUQ5 167 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 EME2A4GXA9 379 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 TK2O00142 265 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 COL6A2P12110 1019 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 PTPN3P26045 913 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 EEF1DP29692 281 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 CCR1P32246 355 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 NR1H2P55055 460 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 NME5P56597 212 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 DLG2Q15700 870 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 RBBP7Q16576 425 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 TAZQ16635 292 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 RAB6CQ53S08 254 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 LPCAT2Q7L5N7 544 aa11.83□□□□□ -0.52
UBE2D3-209ENST00000394804 PTAR1Q7Z6K3 402 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms