RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 RTP3Q9BQQ7 232 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 RTKNQ9BST9 563 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 ILKAPQ9H0C8 392 aaPredicted RBP11.11□□□□□ -0.63
BEST1-201ENST00000378043 RHOJQ9H4E5 214 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 PACSIN3Q9UKS6 424 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
BEST1-201ENST00000378043 ZNF189O75820 626 aaPredicted RBP11.11□□□□□ -0.63
BEST1-201ENST00000378043 F9P00740 461 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 TFEBP19484 476 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 SAT1P21673 171 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 ARNTP27540 789 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 EPHA3P29320 983 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 HOXC8P31273 242 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 LHX1P48742 406 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
BEST1-201ENST00000378043 DENND6AQ8IWF6 608 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 LSMEM2Q8N112 164 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 LPPQ93052 612 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 CSNK1G1Q9HCP0 422 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 RAP2CQ9Y3L5 183 aa11.11□□□□□ -0.63
BEST1-201ENST00000378043 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
BEST1-201ENST00000378043 NEMP1O14524 444 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 HDAC3O15379 428 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 SMIM24O75264 130 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PIGNO95427 931 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 FESP07332 822 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 MYL3P08590 195 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 SERPINB6P35237 376 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 AVPR1AP37288 418 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 RPL14P50914 215 aaKnown RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 NAGLUP54802 743 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 ZNF460Q14592 562 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 LIPMQ5VYY2 423 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 SPNS2Q8IVW8 549 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 FSTL5Q8N475 847 aaPredicted RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 JADE3Q92613 823 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 GPR78Q96P69 363 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 ZNF385DQ9H6B1 395 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PTPRDP23468 1912 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 H2AFYO75367 372 aaKnown RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 CABYRO75952 493 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PGK1P00558 417 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 RAG1P15918 1043 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PIK3R1P27986 724 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 AQP4P55087 323 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
BEST1-201ENST00000378043 CTBP1Q13363 440 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 EIF4EBP2Q13542 120 aaPredicted RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 USP10Q14694 798 aaKnown RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 TSTD2Q5T7W7 516 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 SLC41A1Q8IVJ1 513 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 ARHGAP12Q8IWW6 846 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
BEST1-201ENST00000378043 SMARCD1Q96GM5 515 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 TSGA13Q96PP4 275 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 TSC22D3Q99576 134 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 NUF2Q9BZD4 464 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 RRN3Q9NYV6 651 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 CDH9Q9ULB4 789 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
BEST1-201ENST00000378043 C17orf102A2RUQ5 167 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 AIM2O14862 343 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 DLX3O60479 287 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 HADHAP40939 763 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 MPP1Q00013 466 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 DLG1Q12959 904 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 POU6F1Q14863 301 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 CCL14Q16627 93 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SNX32Q86XE0 403 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 CNTN4Q8IWV2 1026 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SPATA6LQ8N4H0 392 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 RDH11Q8TC12 318 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 GDPD5Q8WTR4 605 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 MYLPFQ96A32 169 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 TLK1Q9UKI8 766 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 RUVBL2Q9Y230 463 aaKnown RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 MRPL42Q9Y6G3 142 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms