RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 SCML1Q9UN30 329 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ALG6Q9Y672 507 aa21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 EP300Q09472 2414 aaPredicted RBP21.39■■□□□ 1.01
MAP1LC3A-202ENST00000374837 GPR179Q6PRD1 2367 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 J3KR12 359 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DFFAO00273 331 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ALOX15BO15296 676 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PJA2O43164 708 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 NDUFS2O75306 463 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 EPN2O95208 641 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 KDELR1P24390 212 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CHRNA3P32297 505 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DHPSP49366 369 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DNA2P51530 1060 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TTC31Q49AM3 519 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CARD16Q5EG05 197 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SPDYCQ5MJ68 293 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ZFYVE27Q5T4F4 411 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 LRRC38Q5VT99 294 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TMCO3Q6UWJ1 677 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DPY19L3Q6ZPD9 716 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DSG4Q86SJ6 1040 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 MAP7D3Q8IWC1 876 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TPCN2Q8NHX9 752 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 GANCQ8TET4 914 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ISG20Q96AZ6 181 aaKnown RBP21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CCDC114Q96M63 670 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 HINFPQ9BQA5 517 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DESI2Q9BSY9 194 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CALN1Q9BXU9 219 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ARRDC1-AS1Q9H2J1 176 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 GOLPH3Q9H4A6 298 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 FBXL12Q9NXK8 326 aa21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 FARP1Q9Y4F1 1045 aaPredicted RBP21.38■■□□□ 1.01
MAP1LC3A-202ENST00000374837 BTNL10A8MVZ5 291 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SPOPO43791 374 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PRAMEF11O60813 436 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ADH1BP00325 375 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CTSLP07711 333 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TNNT1P13805 278 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 C5AR1P21730 350 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PTGER3P43115 390 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RECQLP46063 649 aaPredicted RBP21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 METAP1P53582 386 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 INO80DQ53TQ3 878 aaPredicted RBP21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ANKRD20A8PQ5CZ79 823 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ARHGAP36Q6ZRI8 547 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 USP30Q70CQ3 517 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ARMCX6Q7L4S7 300 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 KIAA1328Q86T90 577 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 AADATQ8N5Z0 425 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PCDH19Q8TAB3 1148 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PIP4K2CQ8TBX8 421 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CASKIN2Q8WXE0 1202 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ZNF670Q9BS34 389 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 GPR174Q9BXC1 333 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 NEUROG2Q9H2A3 272 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PDFQ9HBH1 243 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SERGEFQ9UGK8 458 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 NCKAP1Q9Y2A7 1128 aa21.37■■□□□ 1.01
MAP1LC3A-202ENST00000374837 EML5Q05BV3 1969 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 A0A1W2PP55 124 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 MED19A0JLT2 244 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TMCC1O94876 653 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ACSL1P33121 698 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SFSWAPQ12872 951 aaKnown RBP21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CYTH1Q15438 398 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 FAM46CQ5VWP2 391 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SLC41A1Q8IVJ1 513 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RHOT1Q8IXI2 618 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PLPP6Q8IY26 295 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 HDDC3Q8N4P3 179 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TMIEQ8NEW7 156 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 FAF2Q96CS3 445 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RMDN1Q96DB5 314 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ZNF419Q96HQ0 510 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 OMDQ99983 421 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TM6SF2Q9BZW4 377 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 BTBD1Q9H0C5 482 aa21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 UBA2Q9UBT2 640 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3A-202ENST00000374837 A0A0U1RQJ8 604 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 BCLAF3A2AJT9 711 aaKnown RBP21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 LRRD1A4D1F6 860 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 C1QTNF3-AMACRE9PGA6 284 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RNF103O00237 685 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 RNASEH2AO75792 299 aaKnown RBP21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 TGM1P22735 817 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CREB5Q02930 508 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ZNF33AQ06730 810 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SPEM2Q0P670 501 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 POM121L1PQ3SYA9 428 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 ARSIQ5FYB1 569 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 C11orf63Q6NUN7 778 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 DGLUCYQ7Z3D6 616 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 PQLC3Q8N755 202 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 CALR3Q96L12 384 aaKnown RBP21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 HEPHQ9BQS7 1158 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 SGK2Q9HBY8 427 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 IL36AQ9UHA7 158 aa21.35■■□□□ 1.01
MAP1LC3A-202ENST00000374837 IPO11Q9UI26 975 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms