RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SFSWAPQ12872 951 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 CARD16Q5EG05 197 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 C9orf64Q5T6V5 341 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 MARC1Q5VT66 337 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 TP53INP2Q8IXH6 220 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 RYBPQ8N488 228 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 OR2T3Q8NH03 318 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 FRS2Q8WU20 508 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 OR8D1Q8WZ84 308 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 PBKQ96KB5 322 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 FERMT1Q9BQL6 677 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 FAM126AQ9BYI3 521 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 FCF1Q9Y324 198 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
SPTLC1-202ENST00000337841 APOC4-APOC2K7ER74 178 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 ENC1O14682 589 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 MCF2LO15068 1137 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 MATN3O15232 486 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CEP104O60308 925 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 SIN3BO75182 1162 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 TMCC1O94876 653 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 MAP3K6O95382 1288 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 POP4O95707 220 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CD160O95971 181 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 APOC2P02655 101 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 PYGBP11216 843 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 COL9A1P20849 921 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 RHOAP61586 193 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 AP1B1Q10567 949 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 XRCC4Q13426 336 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 ANGPT1Q15389 498 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CYTH1Q15438 398 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 FAM46CQ5VWP2 391 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 KIAA1211LQ6NV74 962 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 AADACL2Q6P093 401 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 C22orf39Q6P5X5 142 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 NPNTQ6UXI9 565 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CCDC13Q8IYE1 715 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 MAIP1Q8WWC4 291 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 PRCCQ92733 491 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 FATE1Q969F0 183 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 HDAC11Q96DB2 347 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 SIPA1Q96FS4 1042 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 HHIPQ96QV1 700 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 IRF2BPLQ9H1B7 796 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 TNKS2Q9H2K2 1166 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 MTG2Q9H4K7 406 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 PDFQ9HBH1 243 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 PRMT8Q9NR22 394 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 C2orf42Q9NWW7 574 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 EBF1Q9UH73 591 aa12.12□□□□□ -0.47
SPTLC1-202ENST00000337841 CCDC163A0A0D9SF12 145 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 H7C0C1 242 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 K7ESF4 209 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 AXIN1O15169 862 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ALOX15BO15296 676 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 MTSS1O43312 755 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 IGSF6O95976 241 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 GSRP00390 522 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ACADMP11310 421 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 CHRNA3P32297 505 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ATP5OP48047 213 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ADCY2Q08462 1091 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF235Q14590 738 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 MYLK3Q32MK0 819 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF528Q3MIS6 628 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ZNF776Q68DI1 518 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 Q6ZVU0 165 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 STK40Q8N2I9 435 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 OR2AP1Q8NGE2 309 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 TFB1MQ8WVM0 346 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 ERLEC1Q96DZ1 483 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 LGMNQ99538 433 aa12.11□□□□□ -0.47
SPTLC1-202ENST00000337841 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms