RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GYPCP04921 128 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HOXB6P17509 224 aaKnown RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 MIPP30301 263 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 L1CAMP32004 1257 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 NUSAP1Q9BXS6 441 aaKnown RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 TLR6Q9Y2C9 796 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 RNF103O00237 685 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ADRB2P07550 413 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 EPB42P16452 691 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ADRA1DP25100 572 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 LSP1P33241 339 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 GP5P40197 560 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 IL2P60568 153 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 DENND1BQ6P3S1 775 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 PRR23BQ6ZRT6 265 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 METTL21AQ8WXB1 218 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNHIT2Q9UHR6 403 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 CHRNA1P02708 482 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 SOAT1P35610 550 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 DGKEP52429 567 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HK2P52789 917 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 PPP2R2AP63151 447 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ATP13A5Q4VNC0 1218 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HP1BP3Q5SSJ5 553 aaPredicted RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 PCDH20Q8N6Y1 951 aaKnown RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 CHMP2BQ9UQN3 213 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 MEFVO15553 781 aaPredicted RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HAUS5O94927 633 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 DHPSP49366 369 aaPredicted RBP13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 MAPK7Q13164 816 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 FLCNQ8NFG4 579 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 GRIN3AQ8TCU5 1115 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ELMO1Q92556 727 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 VIPAS39Q9H9C1 493 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 MAP10Q9P2G4 905 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 HSFX1Q9UBD0 423 aa13.61□□□□□ -0.23
PRPF38A-201ENST00000257181 ALPIP09923 528 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CCNB1P14635 433 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SDHBP21912 280 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CCNCP24863 283 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SLCO1A2P46721 670 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 LVRNQ6Q4G3 990 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 PTAR1Q7Z6K3 402 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SLC26A11Q86WA9 606 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 COPS8Q99627 209 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ILKAPQ9H0C8 392 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 F8W810 466 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 DIAPH2O60879 1101 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 TNFP01375 233 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ALADP13716 330 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 GJA8P48165 433 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 IL1RL1Q01638 556 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CDK18Q07002 472 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 IL10RBQ08334 325 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 STX5Q13190 355 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 GJB7Q6PEY0 223 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 DOK6Q6PKX4 331 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 PDCD7Q8N8D1 485 aaKnown RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ABHD8Q96I13 439 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 GSDMCQ9BYG8 508 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■□□□□ 8.5
PRPF38A-201ENST00000257181 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ATP6V1C1P21283 382 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 KDELR1P24390 212 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 PRIM2P49643 509 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ESRRGP62508 458 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ADAMTSL2Q86TH1 951 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 OR14C36Q8NHC7 312 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 KIAA1143Q96AT1 154 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CCDC138Q96M89 665 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 MRPL45Q9BRJ2 306 aaKnown RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SNX6Q9UNH7 406 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CORO2BQ9UQ03 480 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 PPP1R11O60927 126 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SAMD14Q8IZD0 417 aaPredicted RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 CDK20Q8IZL9 346 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SUN3Q8TAQ9 357 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 DTX3LQ8TDB6 740 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 SPDL1Q96EA4 605 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 GBP5Q96PP8 586 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 PURBQ96QR8 312 aaKnown RBP13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 FAM83CQ9BQN1 747 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ASB8Q9H765 288 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms