RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 C9orf64Q5T6V5 341 aa20.17■□□□□ 0.82
HOXA6-201ENST00000222728 ANO7Q6IWH7 933 aa20.17■□□□□ 0.82
HOXA6-201ENST00000222728 B4GALNT4Q76KP1 1039 aa20.17■□□□□ 0.82
HOXA6-201ENST00000222728 TM6SF2Q9BZW4 377 aa20.17■□□□□ 0.82
HOXA6-201ENST00000222728 UBA2Q9UBT2 640 aaPredicted RBP20.17■□□□□ 0.82
HOXA6-201ENST00000222728 KCNK3O14649 394 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 ZNF821O75541 412 aaPredicted RBP20.16■□□□□ 0.82
HOXA6-201ENST00000222728 PAPSS2O95340 614 aaPredicted RBP20.16■□□□□ 0.82
HOXA6-201ENST00000222728 APBB3O95704 486 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 TDGF1P13385 188 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 GABRG2P18507 467 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 PTPN7P35236 360 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 CETN2P41208 172 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 CLCN6P51797 869 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 GEMIN4P57678 1058 aaKnown RBP20.16■□□□□ 0.82
HOXA6-201ENST00000222728 CYTH1Q15438 398 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 BBS12Q6ZW61 710 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 STK40Q8N2I9 435 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 PGBD3Q8N328 593 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 MDGA1Q8NFP4 955 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 PRDM16Q9HAZ2 1276 aa20.16■□□□□ 0.82
HOXA6-201ENST00000222728 BCCIPQ9P287 314 aaKnown RBP eCLIP20.16■□□□□ 0.82
HOXA6-201ENST00000222728 TGM2P21980 687 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 CXCR5P32302 372 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 COPAP53621 1224 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 FAM182AQ5T1J6 154 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 CCDC181Q5TID7 509 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 CCNYQ8ND76 341 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 LGMNQ99538 433 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 FAM118BQ9BPY3 351 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 TPSD1Q9BZJ3 242 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 MKRN2Q9H000 416 aaKnown RBP20.15■□□□□ 0.82
HOXA6-201ENST00000222728 WDFY4Q6ZS81 3184 aa20.15■□□□□ 0.82
HOXA6-201ENST00000222728 TCRBV7S2A1N4TA0A589 114 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 TARSL2A2RTX5 802 aaKnown RBP20.14■□□□□ 0.81
HOXA6-201ENST00000222728 PEX11BO96011 259 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 ATP1A1P05023 1023 aaKnown RBP20.14■□□□□ 0.81
HOXA6-201ENST00000222728 NDUFV2P19404 249 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 MX2P20592 715 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 FNTBP49356 437 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 SLC10A7Q0GE19 358 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 ATXN7L2Q5T6C5 722 aaPredicted RBP20.14■□□□□ 0.81
HOXA6-201ENST00000222728 SEL1L2Q5TEA6 688 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 KIAA1324Q6UXG2 1013 aaKnown RBP20.14■□□□□ 0.81
HOXA6-201ENST00000222728 TMPRSS6Q8IU80 811 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 CAMKK1Q8N5S9 505 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 PCDH20Q8N6Y1 951 aaKnown RBP20.14■□□□□ 0.81
HOXA6-201ENST00000222728 CHST14Q8NCH0 376 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 OR6K2Q8NGY2 324 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 OR2T3Q8NH03 318 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 EXOC2Q96KP1 924 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 MRGPRX1Q96LB2 322 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 OLFM3Q96PB7 478 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 FAM129BQ96TA1 746 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 CEP44Q9C0F1 390 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 LHX3Q9UBR4 397 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 FBXO4Q9UKT5 387 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 EFR3BQ9Y2G0 817 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 JRKLQ9Y4A0 524 aa20.14■□□□□ 0.81
HOXA6-201ENST00000222728 CXorf51AA0A1B0GTR3 108 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 ALDH1A2O94788 518 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 SP9P0CG40 484 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 RHOAP61586 193 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 GNG11P61952 73 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 LBRQ14739 615 aaKnown RBP20.13■□□□□ 0.81
HOXA6-201ENST00000222728 INO80DQ53TQ3 878 aaPredicted RBP20.13■□□□□ 0.81
HOXA6-201ENST00000222728 TMCO4Q5TGY1 634 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 DPY19L3Q6ZPD9 716 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 RYBPQ8N488 228 aaPredicted RBP20.13■□□□□ 0.81
HOXA6-201ENST00000222728 PRSS33Q8NF86 280 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 OR2A12Q8NGT7 310 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 UBE2Q2Q8WVN8 375 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 P3H4Q92791 437 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 HDAC11Q96DB2 347 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
HOXA6-201ENST00000222728 WDR24Q96S15 920 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 CINPQ9BW66 212 aaPredicted RBP20.13■□□□□ 0.81
HOXA6-201ENST00000222728 CD93Q9NPY3 652 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 KCND1Q9NSA2 647 aa20.13■□□□□ 0.81
HOXA6-201ENST00000222728 APOC4-APOC2K7ER74 178 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 TJP3O95049 919 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 APOC2P02655 101 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 GKP32189 559 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 RECQLP46063 649 aaPredicted RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 RGRP47804 291 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 PSMD8P48556 350 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 NR2C2P49116 596 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 NUBP1P53384 320 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 RPS14P62263 151 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 OTUD4Q01804 1114 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 AP1B1Q10567 949 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 ELAVL3Q14576 367 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 PDK1Q15118 436 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 POM121L1PQ3SYA9 428 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 CARD16Q5EG05 197 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 ADAT2Q7Z6V5 191 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 ZC3H18Q86VM9 953 aaKnown RBP20.12■□□□□ 0.81
HOXA6-201ENST00000222728 RASSF3Q86WH2 238 aa20.12■□□□□ 0.81
HOXA6-201ENST00000222728 LRRC49Q8IUZ0 686 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms