RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SLC2A13Q96QE2 648 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 APBA2Q99767 749 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 UNKQ9C0B0 810 aaKnown RBP14.08□□□□□ -0.16
PHGDH-233ENST00000642021 VCX3BQ9H321 246 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 TASP1Q9H6P5 420 aa14.08□□□□□ -0.16
PHGDH-233ENST00000642021 RGSL1A5PLK6 1076 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 STX16-NPEPL1H3BU86 382 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 SNAI1O95863 264 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 NPR3P17342 541 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 BAG6P46379 1132 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CSRP3P50461 194 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 TKTL1P51854 596 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 LILRA4P59901 499 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 XIAPP98170 497 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PPIDQ08752 370 aaKnown RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PQLC1Q8N2U9 271 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 SPATA6LQ8N4H0 392 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 ARRDC4Q8NCT1 418 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 USP13Q92995 863 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CENPKQ9BS16 269 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CCDC28BQ9BUN5 200 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 LRRC4Q9HBW1 653 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 UBAP1Q9NZ09 502 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 STAP1Q9ULZ2 295 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PSMD13Q9UNM6 376 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 HDAC3O15379 428 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CFLARO15519 480 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 RTN3O95197 1032 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PGM3O95394 542 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PABPC4LP0CB38 370 aaKnown RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 THRAP10827 490 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 SMPD1P17405 629 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 TAF6P49848 677 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 RPL14P50914 215 aaKnown RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 MRPS22P82650 360 aaKnown RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CEACAM7Q14002 265 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF460Q14592 562 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF423Q2M1K9 1284 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 LSMEM2Q8N112 164 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 KYQ8NBH2 561 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 ICA1LQ8NDH6 482 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 EMID1Q96A84 441 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 OPTNQ96CV9 577 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 RCN3Q96D15 328 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 DRC3Q9H069 523 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 TMEM30AQ9NV96 361 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-233ENST00000642021 RAP2CQ9Y3L5 183 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 DTNAQ9Y4J8 743 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
PHGDH-233ENST00000642021 PEX1O43933 1283 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 HUS1O60921 280 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 CD4P01730 458 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 CHN2P52757 468 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 GK3PQ14409 553 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 GPRIN1Q7Z2K8 1008 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 ANKRD13AQ8IZ07 590 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 ARHGAP18Q8N392 663 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 ZSCAN18Q8TBC5 510 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 KCTD4Q8WVF5 259 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 DCUN1D1Q96GG9 259 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 CNDP1Q96KN2 507 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 CATSPER2Q96P56 530 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 ULBP1Q9BZM6 244 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 GBA3Q9H227 469 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 NUP205Q92621 2012 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 RBM47A0AV96 593 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 TIMM44O43615 452 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 DNAJA2O60884 412 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 AHSGP02765 367 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 MMP3P08254 477 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 SPATA31D3P0C874 917 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 PTPN1P18031 435 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 TPI1P60174 286 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 WSCD1Q658N2 575 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 SEL1L3Q68CR1 1132 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 SPATA31D4Q6ZUB0 917 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 OTOP3Q7RTS5 596 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 ZC3HC1Q86WB0 502 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 LILRA2Q8N149 483 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 SIX6OS1Q8N1H7 587 aa14.06□□□□□ -0.16
PHGDH-233ENST00000642021 DMAP1Q9NPF5 467 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 RUVBL2Q9Y230 463 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 PIN4Q9Y237 131 aaKnown RBP14.06□□□□□ -0.16
PHGDH-233ENST00000642021 C15orf38-AP3S2A0A0A6YYH1 394 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 JCHAINP01591 159 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 SLC35E2BP0CK96 405 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 SMIM18P0DKX4 95 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 DARSP14868 501 aaKnown RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 TTLL12Q14166 644 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 LIPMQ5VYY2 423 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ZYG11AQ6WRX3 759 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 ARPINQ7Z6K5 226 aa14.05□□□□□ -0.16
PHGDH-233ENST00000642021 CENPLQ8N0S6 344 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-233ENST00000642021 FSTL5Q8N475 847 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms