RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MGAT5BQ3V5L5 792 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 VARS2Q5ST30 1063 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FITM2Q8N6M3 262 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ARFGAP1Q8N6T3 406 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PEBP4Q96S96 227 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 C11orf84Q9BUA3 381 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GPAMQ9HCL2 828 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TPP1O14773 563 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HGSO14964 777 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 LRIG2O94898 1065 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 OAZ2O95190 189 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 IQCF3P0C7M6 154 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PRKAR2AP13861 404 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 OGNP20774 298 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PPM1AP35813 382 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SLC34A1Q06495 639 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CA9Q16790 459 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM135Q86UB9 458 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CYP4X1Q8N118 509 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 NKAPQ8N5F7 415 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GPATCH11Q8N954 259 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJC9Q8WXX5 260 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FCRL2Q96LA5 508 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MAGEB10Q96LZ2 347 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RANBP9Q96S59 729 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KIFC1Q9BW19 673 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MRPL1Q9BYD6 325 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SUDS3Q9H7L9 328 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SIRPGQ9P1W8 387 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KCNK1O00180 336 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DCLK1O15075 740 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SNX2O60749 519 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MLLT6P55198 1093 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RAB10P61026 200 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GALNTL6Q49A17 601 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RARS2Q5T160 578 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 LIPMQ5VYY2 423 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MSANTD2Q6P1R3 559 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 LRRC43Q8N309 656 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GLIS1Q8NBF1 620 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 OR52K1Q8NGK4 314 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ELMO2Q96JJ3 720 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CINPQ9BW66 212 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 RGS18Q9NS28 235 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ABI2Q9NYB9 513 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 IL1RAPL1Q9NZN1 696 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ZMYM5Q9UJ78 669 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HAO1Q9UJM8 370 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SCML2Q9UQR0 700 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PCDHB12Q9Y5F1 795 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PSME4Q14997 1843 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM88BA6NKF7 163 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 VPS26AO75436 327 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 METTL18O95568 372 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 BMPR2Q13873 1038 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 DPYSQ14117 519 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TXNDC11Q6PKC3 985 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TAC4Q86UU9 113 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 UMODL1-AS1Q8N2C9 162 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM169Q96HH4 297 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PWWP2AQ96N64 755 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HERPUD2Q9BSE4 406 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TRIM54Q9BYV2 358 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 POPDC3Q9HBV1 291 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 C15orf38-AP3S2A0A0A6YYH1 394 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 NVLO15381 856 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 LMO2P25791 158 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PDAP1Q13442 181 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FASTKD3Q14CZ7 662 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 HERC3Q15034 1050 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 POLD3Q15054 466 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GSTA3Q16772 222 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TTLL9Q3SXZ7 439 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SLC39A12Q504Y0 691 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 TIGD5Q53EQ6 642 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FAM171BQ6P995 826 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ARPINQ7Z6K5 226 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CNDP1Q96KN2 507 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SMOQ99835 787 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SNX15Q9NRS6 342 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 MARCH2Q9P0N8 246 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 COPG2Q9UBF2 871 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 C15orf41Q9Y2V0 281 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 YJEFN3A6XGL0 299 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 KCNU1A8MYU2 1149 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 NPHS1O60500 1241 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FGF19O95750 216 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 PFKMP08237 780 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 LTA4HP09960 611 aaKnown RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CHRM1P11229 460 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SERPINB3P29508 390 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CLCN2P51788 898 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 CLCNKBP51801 687 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SLC5A3P53794 718 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 UNC5BQ8IZJ1 945 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 FEM1CQ96JP0 617 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF512Q96ME7 567 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-210ENST00000635776 GID8Q9NWU2 228 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms