RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 MED15Q96RN5 788 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
SRSF4-208ENST00000634348 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PEG3Q9GZU2 1588 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 KCNH1O95259 989 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 ITGB3P05106 788 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 KLRC1P26715 233 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PAGE2BQ5JRK9 111 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 ZNF438Q7Z4V0 828 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 FAM20CQ8IXL6 584 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PPIL6Q8IXY8 311 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 DNAJA4Q8WW22 397 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-208ENST00000634348 DPF1Q92782 380 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 TRIT1Q9H3H1 467 aaKnown RBP11.51□□□□□ -0.57
SRSF4-208ENST00000634348 RETREG1Q9H6L5 497 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 LYVE1Q9Y5Y7 322 aa11.51□□□□□ -0.57
SRSF4-208ENST00000634348 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 METP08581 1390 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 CIB4A0PJX0 185 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 M0QX08 132 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 NT5C2P49902 561 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 SCNN1BP51168 640 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 VPS72Q15906 364 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 UBXN11Q5T124 520 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 ACOT12Q8WYK0 555 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 NDUFAF1Q9Y375 327 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 EPHA7Q15375 998 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 SPDYCQ5MJ68 293 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 ZZZ3Q8IYH5 903 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 ITCHQ96J02 903 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 NT5C1AQ9BXI3 368 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 UBDO15205 165 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 PIGNO95427 931 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 TKTP29401 623 aaKnown RBP11.5□□□□□ -0.57
SRSF4-208ENST00000634348 SSX6Q7RTT6 188 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 ZNF276Q8N554 614 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
SRSF4-208ENST00000634348 GMPPBQ9Y5P6 360 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 RPS6KL1Q9Y6S9 549 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 TSTD3H0UI37 97 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 IDH2P48735 452 aaKnown RBP11.5□□□□□ -0.57
SRSF4-208ENST00000634348 FAM84BQ96KN1 310 aaPredicted RBP11.5□□□□□ -0.57
SRSF4-208ENST00000634348 CEP41Q9BYV8 373 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 HNF4AP41235 474 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 USP11P51784 963 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 GIT2Q14161 759 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 E2F2Q14209 437 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 CNSTQ6PJW8 725 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 ZNF567Q8N184 647 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 A0A1W2PQC6 194 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 CASKO14936 926 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 RGS14O43566 566 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 REM1O75628 298 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 OR5F1O95221 314 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 LHCGRP22888 699 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 PRKCEQ02156 737 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 PIGKQ92643 395 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 GPATCH2LQ9NWQ4 482 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 VTI1BQ9UEU0 232 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
SRSF4-208ENST00000634348 M0QYT0 321 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 PDXKO00764 312 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 GABBR2O75899 941 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 YAP1P46937 504 aaKnown RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 MPP5Q8N3R9 675 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 MEMO1Q9Y316 297 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 ATXN2Q99700 1313 aaKnown RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 SNAPC5O75971 98 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 GADD45AP24522 165 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 RBM34P42696 430 aaKnown RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CCDC71Q8IV32 467 aaPredicted RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 AGAP11Q8TF27 550 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 HPDLQ96IR7 371 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 SLC38A2Q96QD8 506 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CCNB1IP1Q9NPC3 277 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 FARSBQ9NSD9 589 aaKnown RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 DDIT4Q9NX09 232 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 ARHGEF12Q9NZN5 1544 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CNTFP26441 200 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CCZ1BP86790 482 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 CCZ1P86791 482 aaPredicted RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 ZNF677Q86XU0 584 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 GPATCH1Q9BRR8 931 aaKnown RBP11.49□□□□□ -0.57
SRSF4-208ENST00000634348 WDR19Q8NEZ3 1342 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 GNG14A0A1W2PPG7 69 aa11.49□□□□□ -0.57
SRSF4-208ENST00000634348 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms