RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ULK3Q6PHR2 472 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 KCTD8Q6ZWB6 473 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RIOX2Q8IUF8 465 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 C12orf66Q96MD2 445 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CYTH2Q99418 400 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 FBXO2Q9UK22 296 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CFL2Q9Y281 166 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PVALEFA0A1B0GWK0 134 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TNFP01375 233 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SPANXN2Q5MJ10 180 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ERMARDQ5T6L9 678 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SLC27A1Q6PCB7 646 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MPZL3Q6UWV2 235 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ADPRHL2Q9NX46 363 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 DYTNA2CJ06 578 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MOXD2PA6NHM9 499 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 LRCH4O75427 683 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MMP3P08254 477 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CDC25AP30304 524 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 AMZ1Q400G9 498 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 FAM98BQ52LJ0 330 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TMPPEQ6ZT21 453 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 OXR1Q8N573 874 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ATG16L2Q8NAA4 619 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RBM18Q96H35 190 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SYT15Q9BQS2 421 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MXRA8Q9BRK3 442 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MARCH2Q9P0N8 246 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CCDC195A0A1B0GUA6 201 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TIMM44O43615 452 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PDE9AO76083 593 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ZNF286BP0CG31 522 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 HSD3B1P14060 373 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 BST2Q10589 180 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 EPC2Q52LR7 807 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 BEND6Q5SZJ8 279 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 OTOP2Q7RTS6 562 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 GLT6D1Q7Z4J2 308 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 C19orf18Q8NEA5 215 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TRIM63Q969Q1 353 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RNF25Q96BH1 459 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TRMT61BQ9BVS5 477 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PRDM16Q9HAZ2 1276 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SLAMF7Q9NQ25 335 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 DDX43Q9NXZ2 648 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 AP4E1Q9UPM8 1137 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 IRAK3Q9Y616 596 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 HRGP04196 525 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 PSMD8P48556 350 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ACOT2P49753 483 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 GRM2Q14416 872 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 VPS26BQ4G0F5 336 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 LPCAT1Q8NF37 534 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TOR1AIP2Q8NFQ8 470 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ELMO1Q92556 727 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 DPF2Q92785 391 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ECHDC3Q96DC8 303 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SMYD3Q9H7B4 428 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CYP3A43Q9HB55 503 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ABCC13Q9NSE7 274 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CDH9Q9ULB4 789 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 DNAJC16Q9Y2G8 782 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SPATA31A1Q5TZJ5 1347 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SMCO3A2RU48 225 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 OR6C75A6NL08 312 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RGS14O43566 566 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ENO1P06733 434 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CAP2P40123 477 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ATP6AP1LQ52LC2 224 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RTL4Q6ZR62 310 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MSANTD1Q6ZTZ1 278 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 OAFQ86UD1 273 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 JAZF1Q86VZ6 243 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 LIX1LQ8IVB5 337 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 KSR1Q8IVT5 923 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CACTIN-AS1Q8N1I8 211 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 RIBC1Q8N443 379 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TBATAQ96M53 351 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SMAD5Q99717 465 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 BARHL2Q9NY43 387 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 ZFP69BQ9UJL9 534 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SERTAD3Q9UJW9 196 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 CPDO75976 1380 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 HOXB9P17482 250 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 MSLNQ13421 630 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 LSM12Q3MHD2 195 aaKnown RBP6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SLC39A12Q504Y0 691 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 TMEM35AQ53FP2 167 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 HECTD2Q5U5R9 776 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 OLFML2AQ68BL7 652 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 AAGABQ6PD74 315 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 SYCE2Q6PIF2 218 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 STX12Q86Y82 276 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 UBE2J2Q8N2K1 259 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 GPR156Q8NFN8 814 aa6.38□□□□□ -1.39
CDKL5-205ENST00000623535 KLHL1Q9NR64 748 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms