RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ALG6Q9Y672 507 aa11.03□□□□□ -0.64
TARDBP-223ENST00000620632 LAMA1P25391 3075 aa11.03□□□□□ -0.64
TARDBP-223ENST00000620632 GON4LQ3T8J9 2241 aa11.03□□□□□ -0.64
TARDBP-223ENST00000620632 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.64
TARDBP-223ENST00000620632 IGHV1OR15-9A0A0B4J2B8 117 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 EDDM13A0A1B0GTR0 161 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 J3KR12 359 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 DAPK3O43293 454 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 KDELR3O43731 214 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 CTSLP07711 333 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 TNNT1P13805 278 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 ARL4AP40617 200 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 MRE11P49959 708 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
TARDBP-223ENST00000620632 NDST2P52849 883 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 YBEYP58557 167 aaPredicted RBP11.02□□□□□ -0.65
TARDBP-223ENST00000620632 RPS14P62263 151 aaKnown RBP11.02□□□□□ -0.65
TARDBP-223ENST00000620632 SERINC3Q13530 473 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 KRT81Q14533 505 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 E2F5Q15329 346 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 ACCSLQ4AC99 568 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 NCBP2-AS2Q69YL0 99 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 C22orf39Q6P5X5 142 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 KIAA1328Q86T90 577 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 KBTBD6Q86V97 674 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 PQLC3Q8N755 202 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 FAF2Q96CS3 445 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 PPP1R9BQ96SB3 815 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 RSPH9Q9H1X1 276 aaPredicted RBP11.02□□□□□ -0.65
TARDBP-223ENST00000620632 TNKS2Q9H2K2 1166 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 SERGEFQ9UGK8 458 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 SUN2Q9UH99 717 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 SARDHQ9UL12 918 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
TARDBP-223ENST00000620632 TARSL2A2RTX5 802 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PRR23AA6NEV1 266 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 MFSD11O43934 449 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 BNIP3LO60238 219 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 IPO7O95373 1038 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 KRT7P08729 469 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 KDELR1P24390 212 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 CNR2P34972 360 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 ETFBP38117 255 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PLA2G5P39877 138 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 NNMTP40261 264 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PI4KAP42356 2102 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 SLC1A1P43005 524 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 TPMTP51580 245 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 ZNF135P52742 658 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PARP15Q460N3 678 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PLK5Q496M5 336 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 USP39Q53GS9 565 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 ANKRD20A8PQ5CZ79 823 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 C11orf63Q6NUN7 778 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PRR23BQ6ZRT6 265 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 MMAAQ8IVH4 418 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 LRRC57Q8N9N7 239 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 KCTD6Q8NC69 237 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 CHST14Q8NCH0 376 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 OR2A12Q8NGT7 310 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PRCCQ92733 491 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 KRT35Q92764 455 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 ZNF670Q9BS34 389 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 CALN1Q9BXU9 219 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 DUSP15Q9H1R2 295 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 ITM2CQ9NQX7 267 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 RCOR3Q9P2K3 495 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 PLXNA2O75051 1894 aa11.01□□□□□ -0.65
TARDBP-223ENST00000620632 TP53BP1Q12888 1972 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-223ENST00000620632 MACROD2A1Z1Q3 448 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 LRRD1A4D1F6 860 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 DFFAO00273 331 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 PLK4O00444 970 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 MID1O15344 667 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 ARHGAP6O43182 974 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 SPOPO43791 374 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 PRAMEF11O60813 436 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 TMCC1O94876 653 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 MAP3K6O95382 1288 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 IGLV3-19P01714 112 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 KRT1P04264 644 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 GKP32189 559 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 PSMD8P48556 350 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 CLCN6P51797 869 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 ELAVL3Q14576 367 aaKnown RBP11□□□□□ -0.65
TARDBP-223ENST00000620632 PDK2Q15119 407 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 CYTH1Q15438 398 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 CST6Q15828 149 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 LRRC38Q5VT99 294 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 PMS2CLQ68D20 193 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 ZNF776Q68DI1 518 aaPredicted RBP11□□□□□ -0.65
TARDBP-223ENST00000620632 RETSATQ6NUM9 610 aa11□□□□□ -0.65
TARDBP-223ENST00000620632 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms