RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 GARSP41250 739 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 SATB1Q01826 763 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 PPIDQ08752 370 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 GAS6Q14393 721 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 PARP15Q460N3 678 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 TANGO2Q6ICL3 276 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 WDR93Q6P2C0 686 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 PRR23BQ6ZRT6 265 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 SMARCD2Q92925 531 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 FATE1Q969F0 183 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 ASB16Q96NS5 453 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 TSGA13Q96PP4 275 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 ERP44Q9BS26 406 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 TMEM121Q9BTD3 319 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 C2orf42Q9NWW7 574 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 DMGDHQ9UI17 866 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 GMEB2Q9UKD1 530 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 UTP11Q9Y3A2 253 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 ZFP37Q9Y6Q3 630 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 LAMA1P25391 3075 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 MYOFQ9NZM1 2061 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 SGK1O00141 431 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MTSS1O43312 755 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 HRO43593 1189 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MAP3K6O95382 1288 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 VAV1P15498 845 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MCM3P25205 808 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 SGSHP51688 502 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 DRG2P55039 364 aaKnown RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 RPS24P62847 133 aaKnown RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC6Q16204 474 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 P3H1Q32P28 736 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MPPE1Q53F39 396 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 FAM78AQ5JUQ0 283 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 C6orf118Q5T5N4 469 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 DUPD1Q68J44 220 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 HEATR6Q6AI08 1181 aaKnown RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF783Q6ZMS7 281 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 PRR23CQ6ZRP0 262 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 SETD3Q86TU7 594 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC89Q8N998 374 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 NETO1Q8TDF5 533 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 E2F7Q96AV8 911 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 FERMT1Q9BQL6 677 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 TRIM51Q9BSJ1 452 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 SLC39A8Q9C0K1 460 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 USP29Q9HBJ7 922 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 GDF3Q9NR23 364 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 SEMA4GQ9NTN9 838 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 NDFIP2Q9NV92 336 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 RAB21Q9UL25 225 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 TBC1D30Q9Y2I9 924 aa11.69□□□□□ -0.54
SLIRP-212ENST00000613856 MYO18AQ92614 2054 aaKnown RBP11.69□□□□□ -0.54
SLIRP-212ENST00000613856 EML5Q05BV3 1969 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 KIAA1549LQ6ZVL6 1849 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 ILVBLA1L0T0 632 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 ARHGAP42A6NI28 874 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 CHURC1-FNTBB4DL54 471 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 RASA4BC9J798 803 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 RASA4O43374 803 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 RAMP2O60895 175 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 TBL1XO60907 577 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 LUC7L3O95232 432 aaKnown RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 KRT14P02533 472 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 RBL1P28749 1068 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 PMLP29590 882 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 OR1E1P30953 314 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 ETFBP38117 255 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 RPS9P46781 194 aaKnown RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 FNTBP49356 437 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 GDF10P55107 478 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 MRPS25P82663 173 aaKnown RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 SLC7A5Q01650 507 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 GUCY2DQ02846 1103 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 CUL1Q13616 776 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-212ENST00000613856 C4orf22Q6V702 233 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 GSTA5Q7RTV2 222 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 IFT20Q8IY31 132 aa11.68□□□□□ -0.54
SLIRP-212ENST00000613856 CFAP52Q8N1V2 620 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms