RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
APOC1-201ENST00000586638 SH2D3CQ8N5H7 860 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 LZTR1Q8N653 840 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 FBXO36Q8NEA4 188 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 TTC16Q8NEE8 873 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 MRPS31Q92665 395 aaKnown RBP10.4□□□□□ -0.74
APOC1-201ENST00000586638 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 SERPINB12Q96P63 405 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 GCNAQ96QF7 691 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 TSPYL1Q9H0U9 437 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 GBA3Q9H227 469 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 CENPHQ9H3R5 247 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 ASAH2Q9NR71 780 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 VPS18Q9P253 973 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 IGSF9Q9P2J2 1179 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 RSPH14Q9UHP6 348 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 HCFC2Q9Y5Z7 792 aa10.4□□□□□ -0.74
APOC1-201ENST00000586638 NUP210Q8TEM1 1887 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 ARHGAP42A6NI28 874 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 GOLGA6L10A6NI86 522 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 DRGXA6NNA5 263 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 EIF3HO15372 352 aaKnown RBP eCLIP10.39□□□□□ -0.75
APOC1-201ENST00000586638 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 RRP9O43818 475 aaKnown RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 TSPAN3O60637 253 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 MAFKO60675 156 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 AVILO75366 819 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ZNF189O75820 626 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 OLFM2O95897 454 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 JCHAINP01591 159 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 HLA-DQB2P05538 268 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 CDC25CP30307 473 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 CD68P34810 354 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 CCR2P41597 374 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 GRIA1P42261 906 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 SLCO1A2P46721 670 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 MAPKAPK2P49137 400 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 GYS2P54840 703 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 EIF3BP55884 814 aaKnown RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 RPS24P62847 133 aaKnown RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 IFI35P80217 286 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 OLIG2Q13516 323 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 EFTUD2Q15029 972 aaKnown RBP eCLIP10.39□□□□□ -0.755e-13■■□□□ 14.1
APOC1-201ENST00000586638 RABGAP1LQ5R372 815 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ATAT1Q5SQI0 421 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 KCTD16Q68DU8 428 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ITPRIPL1Q6GPH6 555 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ASTLQ6HA08 431 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 PID1Q7Z2X4 250 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ZNF354CQ86Y25 554 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 UMODL1-AS1Q8N2C9 162 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 TMEM105Q8N8V8 129 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 CFAP36Q96G28 342 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 TTC25Q96NG3 672 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 AGAP3Q96P47 875 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 TSGA13Q96PP4 275 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 MLPHQ9BV36 600 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 MFSD1Q9H3U5 465 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 VPS37BQ9H9H4 285 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 CDH22Q9UJ99 828 aa10.39□□□□□ -0.75
APOC1-201ENST00000586638 AGO1Q9UL18 857 aaKnown RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 ZFP37Q9Y6Q3 630 aaPredicted RBP10.39□□□□□ -0.75
APOC1-201ENST00000586638 TRAV19A0A0A6YYK7 116 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 TLDC2A0PJX2 215 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 MTSS1O43312 755 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 CKMP06732 381 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 ABHD2P08910 425 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 MYZAPP0CAP1 466 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 CCNCP24863 283 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 ACVRL1P37023 503 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 NBL1P41271 181 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 ELK3P41970 407 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 CLCN5P51795 746 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 NDST2P52849 883 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 GPX6P59796 221 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 NTHL1P78549 312 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 ZXDBP98169 803 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 MTA1Q13330 715 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 SPARCL1Q14515 664 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 LONRF1Q17RB8 773 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 PARP6Q2NL67 630 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 C5orf22Q49AR2 442 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 PABPC1LQ4VXU2 614 aaKnown RBP10.38□□□□□ -0.75
APOC1-201ENST00000586638 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
APOC1-201ENST00000586638 DNAJC21Q5F1R6 531 aaKnown RBP10.38□□□□□ -0.75
APOC1-201ENST00000586638 RARS2Q5T160 578 aaKnown RBP10.38□□□□□ -0.75
APOC1-201ENST00000586638 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms