RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PLIN3O60664 434 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 DEAF1O75398 565 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 GRAP2O75791 330 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 C4BPAP04003 597 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 IL10P22301 178 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 RBL1P28749 1068 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 MRPS15P82914 257 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 MS4A2Q01362 244 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CAPSQ13938 189 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 IKBKEQ14164 716 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TAF5Q15542 800 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 FAM102AQ5T9C2 384 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TDRD10Q5VZ19 366 aaKnown RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TMEM198Q66K66 360 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CES3Q6UWW8 571 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 PHF13Q86YI8 300 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 LILRA2Q8N149 483 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 DCLK2Q8N568 766 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CHST13Q8NET6 341 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CALML6Q8TD86 181 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 ADPGKQ9BRR6 497 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 POLR3FQ9H1D9 316 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-212ENST00000574799 EHD1Q9H4M9 534 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 CNGB3Q9NQW8 809 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 TEX264Q9Y6I9 313 aa9.74□□□□□ -0.85
CCDC40-212ENST00000574799 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TMX2-CTNND1H3BSU7 103 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CLIC3O95833 236 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TTKP33981 857 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TRPC1P48995 793 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 BMXP51813 675 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 SNRPFP62306 86 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 EMC2Q15006 297 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TBCELQ5QJ74 424 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CHST15Q7LFX5 561 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CMC1Q7Z7K0 106 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ZCCHC7Q8N3Z6 543 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TERB1Q8NA31 727 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 RP9Q8TA86 221 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 STARD8Q92502 1023 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DCPSQ96C86 337 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 SLC38A7Q9NVC3 462 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ZNF358Q9NW07 568 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TTLL3Q9Y4R7 772 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ST14Q9Y5Y6 855 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 HEATR9A2RTY3 570 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 FAM149AA5PLN7 773 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 A8MU76 341 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 SNNO75324 88 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DGAT1O75907 488 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 FBXO21O94952 628 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ATE1O95260 518 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PSAPP07602 524 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GLRBP48167 497 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TFAMQ00059 246 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CEACAM7Q14002 265 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DPYSQ14117 519 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 OR6B2Q6IFH4 312 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ALDH16A1Q8IZ83 802 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 UNC5BQ8IZJ1 945 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DNAAF3Q8N9W5 541 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 HM13Q8TCT9 377 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GPR20Q99678 358 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 FRMD8P1Q9BZ68 369 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CDH19Q9H159 772 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 C17orf75Q9HAS0 396 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GPATCH2LQ9NWQ4 482 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TMEM216Q9P0N5 145 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 RIMS3Q9UJD0 308 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GNPTGQ9UJJ9 305 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 AGO2Q9UKV8 859 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GIT1Q9Y2X7 761 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 WDR27A2RRH5 827 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 E7ESA3 106 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TRIM38O00635 465 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CHADO15335 359 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PHGDHO43175 533 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 MSCO60682 206 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CYP2C9P11712 490 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 MMP8P22894 467 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PRDX6P30041 224 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GMPRP36959 345 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 GRIA3P42263 894 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 YAP1P46937 504 aaKnown RBP9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PSME3P61289 254 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CD300CQ08708 224 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PLCL1Q15111 1095 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 DGKDQ16760 1214 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 MBLAC2Q68D91 279 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 TAS2R42Q7RTR8 314 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 ADGRF2Q8IZF7 708 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 PGAM4Q8N0Y7 254 aa9.73□□□□□ -0.85
CCDC40-212ENST00000574799 CBR4Q8N4T8 237 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms