RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PPARGC1AQ9UBK2 798 aaKnown RBP13□□□□□ -0.33
NPLOC4-213ENST00000573519 DNAI1Q9UI46 699 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 PPM1HQ9ULR3 514 aa13□□□□□ -0.33
NPLOC4-213ENST00000573519 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 TMCO5BA8MYB1 307 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM72CH0Y354 149 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 KPNA3O00505 521 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ALOX15BO15296 676 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 SMAD6O43541 496 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 CHRNA3P32297 505 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 RECQLP46063 649 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 DNA2P51530 1060 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 CCR5P51681 352 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 HDAC4P56524 1084 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 GSCP56915 257 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 PPP2CBP62714 309 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 PPP2CAP67775 309 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 TPM4P67936 248 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 FANCCQ00597 558 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 IL9RQ01113 521 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 GNA12Q03113 381 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 HNRNPDQ14103 355 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 NR1I3Q14994 352 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ASIC2Q16515 512 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM72AQ5TYM5 149 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ACAD10Q6JQN1 1059 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM72DQ6L9T8 149 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 RETSATQ6NUM9 610 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 C22orf39Q6P5X5 142 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 DCUN1D2Q6PH85 259 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ZNF783Q6ZMS7 281 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 FAM72BQ86X60 149 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ZNF354CQ86Y25 554 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 OR2A12Q8NGT7 310 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 GRIN3AQ8TCU5 1115 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D31Q96DN5 1066 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 ORAI3Q9BRQ5 295 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 MAGEB5Q9BZ81 275 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
NPLOC4-213ENST00000573519 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 GOLGA6L19H0YKK7 550 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 SLC7A4O43246 635 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CCP110O43303 1012 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CTSLP07711 333 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 ZNF883P0CG24 379 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 RHOQP17081 205 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 DESP17661 470 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CD38P28907 300 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 ACVRL1P37023 503 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CLCN6P51797 869 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 SUZ12Q15022 739 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 ST3GAL2Q16842 350 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 SLC45A4Q5BKX6 768 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 EFHC2Q5JST6 749 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 KCNT1Q5JUK3 1230 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 ARTNQ5T4W7 220 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 E4F1Q66K89 784 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 IRF2BP2Q7Z5L9 587 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CHST14Q8NCH0 376 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 RHBDD1Q8TEB9 315 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 SCNM1Q9BWG6 230 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 OSBPL2Q9H1P3 480 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 NDFIP2Q9NV92 336 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 ZNF212Q9UDV6 495 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 IL36AQ9UHA7 158 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 PCOLCE2Q9UKZ9 415 aa12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 FCF1Q9Y324 198 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-213ENST00000573519 A0A1W2PQC6 194 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 H0Y8X5 98 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 WNT9AO14904 365 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 VILLO15195 856 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 FLRT2O43155 660 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 LRIG2O94898 1065 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 PRNPP04156 253 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 ETFBP38117 255 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 CTSKP43235 329 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 MAPKAPK2P49137 400 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 SERPINH1P50454 418 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 CCT8P50990 548 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 ZNF143P52747 638 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 UBASH3AP57075 661 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 RPL7AP62424 266 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 ARF5P84085 180 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
NPLOC4-213ENST00000573519 DPY19L3Q6ZPD9 716 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms