RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 APBB1IPQ7Z5R6 666 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 ZNF677Q86XU0 584 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 TMPRSS6Q8IU80 811 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 RPUSD2Q8IZ73 545 aaKnown RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 METTL13Q8N6R0 699 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 MCPH1Q8NEM0 835 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 TRPV1Q8NER1 839 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 PIGOQ8TEQ8 1089 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 HDAC7Q8WUI4 952 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 MAIP1Q8WWC4 291 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 IFT81Q8WYA0 676 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 ATP6V0A1Q93050 837 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 RAX2Q96IS3 184 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 ATP6V1G3Q96LB4 118 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 ZNF512Q96ME7 567 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 GLT1D1Q96MS3 346 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 PSMB7Q99436 277 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 AGPAT1Q99943 283 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 SENP7Q9BQF6 1050 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 PAGR1Q9BTK6 254 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 UNC45AQ9H3U1 944 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 AGO4Q9HCK5 861 aaKnown RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 MTRF1LQ9UGC7 380 aaKnown RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 FEZ2Q9UHY8 353 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 MTUS1Q9ULD2 1270 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 NFU1Q9UMS0 254 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 RRP15Q9Y3B9 282 aaKnown RBP5.56□□□□□ -1.52
CAPN3-217ENST00000567817 UBIAD1Q9Y5Z9 338 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 TRANK1O15050 2925 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 MYH8P13535 1937 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 CACNA1BQ00975 2339 aa5.56□□□□□ -1.52
CAPN3-217ENST00000567817 PRRC2BQ5JSZ5 2229 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 A0A087WUV0 522 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CCDC169A6NNP5 214 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CLIC2O15247 247 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 RAD51CO43502 376 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 FZD7O75084 574 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ZBED4O75132 1171 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 RTN2O75298 545 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 KIAA0754O94854 1291 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 LTA4HP09960 611 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 NUDT17P0C025 328 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ACTN1P12814 892 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 AKR1A1P14550 325 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CSF2RAP15509 400 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 NR1D1P20393 614 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CST5P28325 142 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ADORA2AP29274 412 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 NMT1P30419 496 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 YWHABP31946 246 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CTNNA1P35221 906 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SLC1A1P43005 524 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 FNTAP49354 379 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CARSP49589 748 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 MAN2A2P49641 1150 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CASP4P49662 377 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 GNGT1P63211 74 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 TMPRSS15P98073 1019 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 DUSP2Q05923 314 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 MAPK7Q13164 816 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 DRP2Q13474 957 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 PLS1Q14651 629 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 RRP1BQ14684 758 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SLMAPQ14BN4 828 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 LEXMQ3ZCV2 418 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 EPC2Q52LR7 807 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SEL1L2Q5TEA6 688 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 WDR78Q5VTH9 848 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 KRT39Q6A163 491 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 LRRC31Q6UY01 552 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 TRIM72Q6ZMU5 477 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ZNF365Q70YC5 407 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 HTR3DQ70Z44 454 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 KLHL7Q8IXQ5 586 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 GSPT2Q8IYD1 628 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SPICE1Q8N0Z3 855 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 Q8N1X5 172 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CYP2W1Q8TAV3 490 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SLC35G2Q8TBE7 412 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 BCAS4Q8TDM0 211 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ACER1Q8TDN7 264 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 P3H4Q92791 437 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 MS4A14Q96JA4 679 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 NT5C1BQ96P26 610 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 ZIM3Q96PE6 472 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 FMO2Q99518 471 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 NTPCRQ9BSD7 190 aaKnown RBP5.55□□□□□ -1.52
CAPN3-217ENST00000567817 PACSIN1Q9BY11 444 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 MROH8Q9H579 483 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 SLC38A10Q9HBR0 1119 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 TMBIM4Q9HC24 238 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 TMEM8AQ9HCN3 771 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 HOMER3Q9NSC5 361 aa5.55□□□□□ -1.52
CAPN3-217ENST00000567817 CHD7Q9P2D1 2997 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms