RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 YWHAQP27348 245 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.52
CDH1-210ENST00000566612 DAOAP59103 153 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 BTKQ06187 659 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 SREBF2Q12772 1141 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 IMPG1Q17R60 797 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 OLFML2BQ68BL8 750 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.52
CDH1-210ENST00000566612 OSTM1Q86WC4 334 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 ULK2Q8IYT8 1036 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 LRRC43Q8N309 656 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 LZTR1Q8N653 840 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 DQX1Q8TE96 717 aaKnown RBP11.77□□□□□ -0.52
CDH1-210ENST00000566612 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 PPP1R2P1Q96PQ5 205 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 ZCWPW1Q9H0M4 648 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 POMKQ9H5K3 350 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 USP29Q9HBJ7 922 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.52
CDH1-210ENST00000566612 ATP6AP2A0A1C7CYW4 349 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 NT5C1B-RDH14C9J2C7 533 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 NRP1O14786 923 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 BIRC5O15392 142 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ATP6AP2O75787 350 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PTPN3P26045 913 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PPARGP37231 505 aaPredicted RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 RPL14P50914 215 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 STX5Q13190 355 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PTK2BQ14289 1009 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 CAND1Q86VP6 1230 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 CRYBG2Q8N1P7 616 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ARHGAP18Q8N392 663 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 ZSCAN18Q8TBC5 510 aaPredicted RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 FAXDC2Q96IV6 333 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 NFKBIZQ9BYH8 718 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 TBC1D13Q9NVG8 400 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 COPG2Q9UBF2 871 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 BAG5Q9UL15 447 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 ARL5CA6NH57 179 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PLIN3O60664 434 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 CYP3A5P20815 502 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 RAB27AP51159 221 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 FSTL4Q6MZW2 842 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 CDHR3Q6ZTQ4 885 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 TAC4Q86UU9 113 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 PCDH20Q8N6Y1 951 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 ATAD1Q8NBU5 361 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 NCLNQ969V3 563 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 CNBD2Q96M20 576 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 SSU72Q9NP77 194 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.53
CDH1-210ENST00000566612 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 FBXO5Q9UKT4 447 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 FAM50BQ9Y247 325 aa11.77□□□□□ -0.53
CDH1-210ENST00000566612 UBDO15205 165 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 USP1O94782 785 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 SERPINA6P08185 405 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 MLNP12872 115 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 SLC11A2P49281 568 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 FLT3LGP49771 235 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 ESRRGP62508 458 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PDE1CQ14123 709 aaPredicted RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 FUT11Q495W5 492 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 ZNF280DQ6N043 979 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 EXOC2Q96KP1 924 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 APOL5Q9BWW9 433 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 FBXO44Q9H4M3 255 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 ALG9Q9H6U8 611 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 COG4Q9H9E3 785 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 RNF112Q9ULX5 631 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 LAMB2P55268 1798 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 HEATR9A2RTY3 570 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 H0Y626 953 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 FKBP6O75344 327 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 CNMDO75829 334 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 RBP1P09455 135 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 RAG1P15918 1043 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PROZP22891 400 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 MPSTP25325 297 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 WNT3AP56704 352 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 SLC10A2Q12908 348 aaPredicted RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 NAB1Q13506 487 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 AP1ARQ63HQ0 302 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 PTRHD1Q6GMV3 140 aaKnown RBP11.76□□□□□ -0.53
CDH1-210ENST00000566612 IYDQ6PHW0 289 aa11.76□□□□□ -0.53
CDH1-210ENST00000566612 LDB1Q86U70 411 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms