RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RHOT2Q8IXI1 618 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 UMODL1-AS1Q8N2C9 162 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 CHST14Q8NCH0 376 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 ZC3H10Q96K80 434 aaKnown RBP19.11■□□□□ 0.65
CASC4-209ENST00000559222 SPACA7Q96KW9 195 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 CSPG4P5Q96PW8 444 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 NCAPGQ9BPX3 1015 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 DESI2Q9BSY9 194 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 SLC39A8Q9C0K1 460 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 MAGEH1Q9H213 219 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 SMOC1Q9H4F8 434 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 PARD6AQ9NPB6 346 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 ITM2CQ9NQX7 267 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 SARDHQ9UL12 918 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 SHROOM3Q8TF72 1996 aa19.11■□□□□ 0.65
CASC4-209ENST00000559222 TARSL2A2RTX5 802 aaKnown RBP19.1■□□□□ 0.65
CASC4-209ENST00000559222 CTSLP07711 333 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 C7P10643 843 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 IL4RP24394 825 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 MAN1A1P33908 653 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 PTGER3P43115 390 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 CDH6P55285 790 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 TCEAL1Q15170 157 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 CST6Q15828 149 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 AFMIDQ63HM1 303 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 LACRTQ9GZZ8 138 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 NCDNQ9UBB6 729 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 RAB23Q9ULC3 237 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 DUSP10Q9Y6W6 482 aa19.1■□□□□ 0.65
CASC4-209ENST00000559222 FRYLO94915 3013 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 ATXN2Q99700 1313 aaKnown RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 H3BRJ5 948 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 J3KR12 359 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 ZBTB24O43167 697 aaPredicted RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 DAPK3O43293 454 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 KDELR3O43731 214 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 BUB1BO60566 1050 aaPredicted RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 HTR7P34969 479 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 NNMTP40261 264 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 SERINC3Q13530 473 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 DPYSL3Q14195 570 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 SPA17Q15506 151 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 METTL3Q86U44 580 aaKnown RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 ZNF354CQ86Y25 554 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 SLC41A1Q8IVJ1 513 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 AADATQ8N5Z0 425 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 OR2A12Q8NGT7 310 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 FAM71BQ8TC56 605 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 VOPP1Q96AW1 172 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 TOE1Q96GM8 510 aaKnown RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 PABPC3Q9H361 631 aaKnown RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 RETREG1Q9H6L5 497 aa19.09■□□□□ 0.65
CASC4-209ENST00000559222 WSB2Q9NYS7 404 aaPredicted RBP19.09■□□□□ 0.65
CASC4-209ENST00000559222 A0A1W2PP55 124 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 ZNF217O75362 1048 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 EPN2O95208 641 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 IGLV3-19P01714 112 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 TGM1P22735 817 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 ACSL1P33121 698 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 HCAR3P49019 387 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 DHPSP49366 369 aaPredicted RBP19.08■□□□□ 0.64
CASC4-209ENST00000559222 PAPOLAP51003 745 aaKnown RBP19.08■□□□□ 0.64
CASC4-209ENST00000559222 RPL6Q02878 288 aaKnown RBP19.08■□□□□ 0.64
CASC4-209ENST00000559222 SPEM2Q0P670 501 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 KRT81Q14533 505 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 ELAVL3Q14576 367 aaKnown RBP19.08■□□□□ 0.64
CASC4-209ENST00000559222 HADHQ16836 314 aaKnown RBP19.08■□□□□ 0.64
CASC4-209ENST00000559222 OR6K2Q8NGY2 324 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 RAPGEF5Q92565 580 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 HINFPQ9BQA5 517 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 TM6SF2Q9BZW4 377 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 ARRDC1-AS1Q9H2J1 176 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 FBRSQ9HAH7 460 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 GRPEL1Q9HAV7 217 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 PDFQ9HBH1 243 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 TRIM10Q9UDY6 481 aa19.08■□□□□ 0.64
CASC4-209ENST00000559222 PLXNA2O75051 1894 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 MAP3K13O43283 966 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 BUB1O43683 1085 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 IL1BP01584 269 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 DNTTP04053 509 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 ACADMP11310 421 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 TNNT1P13805 278 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 COMTP21964 271 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 CD6P30203 668 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 GKP32189 559 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 SLC8A1P32418 973 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 DRD3P35462 400 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 ETFBP38117 255 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 ARL4AP40617 200 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 NOP2P46087 812 aaKnown RBP19.07■□□□□ 0.64
CASC4-209ENST00000559222 HADHBP55084 474 aaKnown RBP19.07■□□□□ 0.64
CASC4-209ENST00000559222 YBEYP58557 167 aaPredicted RBP19.07■□□□□ 0.64
CASC4-209ENST00000559222 ELF2Q15723 593 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 PARP15Q460N3 678 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 ATXN7L2Q5T6C5 722 aaPredicted RBP19.07■□□□□ 0.64
CASC4-209ENST00000559222 RETSATQ6NUM9 610 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 DPY19L3Q6ZPD9 716 aa19.07■□□□□ 0.64
CASC4-209ENST00000559222 OR8D1Q8WZ84 308 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms