RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 RHOT2Q8IXI1 618 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 TXLNBQ8N3L3 684 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF366Q8N895 744 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 SUMF1Q8NBK3 374 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 RLN3Q8WXF3 142 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 OR8D1Q8WZ84 308 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 P2RY11Q96G91 374 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ZC3H10Q96K80 434 aaKnown RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 MAGEH1Q9H213 219 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 TMEM245Q9H330 911 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ZWILCHQ9H900 591 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 PRSS16Q9NQE7 514 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 DYRK4Q9NR20 520 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 TMEM248Q9NWD8 314 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 INTS6Q9UL03 887 aaKnown RBP8.53□□□□□ -1.04
PSEN1-223ENST00000557511 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 PCDHGA5Q9Y5G8 931 aa8.53□□□□□ -1.04
PSEN1-223ENST00000557511 ZSCAN5CA6NGD5 496 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-223ENST00000557511 MEI4A8MW99 385 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 LCE2BO14633 110 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 DCLK1O15075 740 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 SIN3BO75182 1162 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 EPN2O95208 641 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 IL1BP01584 269 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 CYP1A2P05177 515 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 CD6P30203 668 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 MIPP30301 263 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-223ENST00000557511 DNA2P51530 1060 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 YBEYP58557 167 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-223ENST00000557511 KRT81Q14533 505 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 ELAVL3Q14576 367 aaKnown RBP8.52□□□□□ -1.05
PSEN1-223ENST00000557511 DLG2Q15700 870 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 WDR45BQ5MNZ6 344 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 LYSMD4Q5XG99 296 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 RABEPKQ7Z6M1 372 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 RTL3Q8N8U3 475 aaKnown RBP8.52□□□□□ -1.05
PSEN1-223ENST00000557511 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 HSPH1Q92598 858 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 LMLNQ96KR4 655 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 OMDQ99983 421 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 BTBD1Q9H0C5 482 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 ARRDC1-AS1Q9H2J1 176 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 ANLNQ9NQW6 1124 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 ITM2CQ9NQX7 267 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 SLCO3A1Q9UIG8 710 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 KIAA1549LQ6ZVL6 1849 aa8.52□□□□□ -1.05
PSEN1-223ENST00000557511 MYOFQ9NZM1 2061 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 IGHV1OR15-9A0A0B4J2B8 117 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 CXorf51AA0A1B0GTR3 108 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 ARHGAP42A6NI28 874 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TMEM110-MUSTN1A8MSY1 372 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 ALOX15BO15296 676 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NRDCO43847 1150 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 ATP9BO43861 1147 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 LRCH4O75427 683 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PRNPP04156 253 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 KRT7P08729 469 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 GNSP15586 552 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SDHBP21912 280 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MAGEA1P43355 309 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NOP2P46087 812 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PSMD8P48556 350 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NUMBP49757 651 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 STK19P49842 368 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 IRAK1P51617 712 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 COPAP53621 1224 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 OGDHQ02218 1023 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 LMNB2Q03252 620 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 RAD51Q06609 339 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TBX2Q13207 712 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PARP15Q460N3 678 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 AASDHQ4L235 1098 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 RAB6CQ53S08 254 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MANEALQ5VSG8 457 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 ARMCX6Q7L4S7 300 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 FAM124AQ86V42 546 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TMTC1Q8IUR5 882 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 MMAAQ8IVH4 418 aaKnown RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 TMEFF1Q8IYR6 380 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF683Q8IZ20 524 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PYROXD2Q8N2H3 581 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 RYBPQ8N488 228 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-223ENST00000557511 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 PAF1Q8N7H5 531 aa8.51□□□□□ -1.05
PSEN1-223ENST00000557511 NIPA2Q8N8Q9 360 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms