RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 KRT86O43790 486 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 RNASEH1O60930 286 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 RPP40O75818 363 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 CCDC175P0C221 793 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 MMRN1Q13201 1228 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 ELAVL3Q14576 367 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 ANKRD20A8PQ5CZ79 823 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF776Q68DI1 518 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 KIAA1324Q6UXG2 1013 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 ARHGAP12Q8IWW6 846 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 SYCE1Q8N0S2 351 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 NPWQ8N729 165 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 KIAA1524Q8TCG1 905 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 ISG20Q96AZ6 181 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 CELF6Q96J87 481 aaKnown RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 PDLIM2Q96JY6 352 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 SPACA7Q96KW9 195 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 TPSD1Q9BZJ3 242 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 RSPH9Q9H1X1 276 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 GOLPH3Q9H4A6 298 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 FAM86C1Q9NVL1 165 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 KLHL11Q9NVR0 708 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 FARP1Q9Y4F1 1045 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-203ENST00000546803 MACROD2A1Z1Q3 448 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 GRID2IPA4D2P6 1211 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PROB1E7EW31 1015 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 K7ERQ8 282 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 ALOX15BO15296 676 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 CD160O95971 181 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 KRT1P04264 644 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PTMAP06454 111 aaKnown RBP17.15■□□□□ 0.34
CCDC38-203ENST00000546803 TNNT1P13805 278 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PAPOLAP51003 745 aaKnown RBP17.15■□□□□ 0.34
CCDC38-203ENST00000546803 SFSWAPQ12872 951 aaKnown RBP17.15■□□□□ 0.34
CCDC38-203ENST00000546803 INO80DQ53TQ3 878 aaPredicted RBP17.15■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF662Q6ZS27 426 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 DSG4Q86SJ6 1040 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 LRRC49Q8IUZ0 686 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PLPP6Q8IY26 295 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PCDH20Q8N6Y1 951 aaKnown RBP17.15■□□□□ 0.34
CCDC38-203ENST00000546803 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 PCDH19Q8TAB3 1148 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 OR8D1Q8WZ84 308 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 ERLEC1Q96DZ1 483 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 EPC1Q9H2F5 836 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 ETNK2Q9NVF9 386 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 SCML1Q9UN30 329 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
CCDC38-203ENST00000546803 C3orf70A6NLC5 250 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 DFFAO00273 331 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 MCF2LO15068 1137 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 SMAD6O43541 496 aaKnown RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 PRAMEF11O60813 436 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 ACADMP11310 421 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 VAV1P15498 845 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 P2RY2P41231 377 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 RECQLP46063 649 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 RPS14P62263 151 aaKnown RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 MAP7D1Q3KQU3 841 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 C22orf39Q6P5X5 142 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 Q6ZVU0 165 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 CEP68Q76N32 757 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 KATNAL2Q8IYT4 538 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 FAM129BQ96TA1 746 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 MAK16Q9BXY0 300 aaKnown RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 SLC6A17Q9H1V8 727 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 ITM2CQ9NQX7 267 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 USP36Q9P275 1121 aaKnown RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 UBA2Q9UBT2 640 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-203ENST00000546803 TRIM10Q9UDY6 481 aa17.14■□□□□ 0.33
CCDC38-203ENST00000546803 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 ZRANB2O95218 330 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 IGLV3-19P01714 112 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 DNTTP04053 509 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 ZFXP17010 805 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 OXTRP30559 389 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 CTNNA1P35221 906 aaKnown RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 IL10RBQ08334 325 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 RFTN1Q14699 578 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 TTC31Q49AM3 519 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 FAM46CQ5VWP2 391 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 RCOR2Q8IZ40 523 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 PQLC3Q8N755 202 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 NKD2Q969F2 451 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 SP110Q9HB58 689 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 PDFQ9HBH1 243 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 IPO11Q9UI26 975 aaKnown RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 RAB23Q9ULC3 237 aa17.13■□□□□ 0.33
CCDC38-203ENST00000546803 FCF1Q9Y324 198 aaKnown RBP17.13■□□□□ 0.33
CCDC38-203ENST00000546803 MFHAS1Q9Y4C4 1052 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms