RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TDRPQ86YL5 185 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 CPXM2Q8N436 756 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 SMRP1Q8NCR6 262 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 SUSD6Q92537 303 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 HDAC11Q96DB2 347 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 ALG14Q96F25 216 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 CABS1Q96KC9 395 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 ASB16Q96NS5 453 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 RPRD1AQ96P16 312 aaPredicted RBP7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 GCNAQ96QF7 691 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 MAK16Q9BXY0 300 aaKnown RBP7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 FRMD8Q9BZ67 464 aaPredicted RBP7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 ZYG11BQ9C0D3 744 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 TRPV4Q9HBA0 871 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 TDP1Q9NUW8 608 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 TBC1D30Q9Y2I9 924 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 OR51B4Q9Y5P0 310 aa7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 ZFP37Q9Y6Q3 630 aaPredicted RBP7.16□□□□□ -1.26
HMGCS2-204ENST00000544913 SHROOM3Q8TF72 1996 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 F5H5T6 163 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ZNF197O14709 1029 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 MCF2LO15068 1137 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ALOX15BO15296 676 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ZNF189O75820 626 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 PENKP01210 267 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 CHN1P15882 459 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 HOXB8P17481 243 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 FSHRP23945 695 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 PHBP35232 272 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 VIPR2P41587 438 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 MAGEA4P43358 317 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 GAD2Q05329 585 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 MTA1Q13330 715 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ITIH4Q14624 930 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 P3H1Q32P28 736 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 FSCBQ5H9T9 825 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ACBD5Q5T8D3 534 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 PRPF38BQ5VTL8 546 aaKnown RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 FYB2Q5VWT5 728 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 TTC19Q6DKK2 380 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 C6orf89Q6UWU4 347 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 CHST9Q7L1S5 443 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 KLHDC8BQ8IXV7 354 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 CNTD1Q8N815 330 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 ARHGEF2Q92974 986 aaKnown RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 HMCESQ96FZ2 354 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 GUCD1Q96NT3 240 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 TSGA13Q96PP4 275 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 MYADMQ96S97 322 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 RBM15Q96T37 977 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 LINC00597Q9H2U6 94 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 CATSPERBQ9H7T0 1116 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 PDFQ9HBH1 243 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 SAMD15Q9P1V8 674 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 SLC24A2Q9UI40 661 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 FARP1Q9Y4F1 1045 aaPredicted RBP7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 RAD54BQ9Y620 910 aa7.15□□□□□ -1.26
HMGCS2-204ENST00000544913 A0A0D9SEW6 157 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 CFAP69A5D8W1 941 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 HACD1B0YJ81 288 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 RASA4BC9J798 803 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 KCNK1O00180 336 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 RASA4O43374 803 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 TSPAN3O60637 253 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ZMPSTE24O75844 475 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 METTL18O95568 372 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ACSL3O95573 720 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 CD160O95971 181 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PTPN3P26045 913 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 CD68P34810 354 aaPredicted RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 AVPR1AP37288 418 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 MAGEA6P43360 314 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 MAPKAPK2P49137 400 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PAPOLAP51003 745 aaKnown RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 SEC24CP53992 1094 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PDK1Q15118 436 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 KYNUQ16719 465 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 SKIDA1Q1XH10 827 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 UBAP2Q5T6F2 1119 aaKnown RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ANKRD22Q5VYY1 191 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ASTLQ6HA08 431 aaPredicted RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ELMSAN1Q6PJG2 1045 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 CCDC121Q6ZUS5 278 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 Q7L0L9 218 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 EXOC3L1Q86VI1 746 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PPIL6Q8IXY8 311 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 C10orf67Q8IYJ2 551 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ST13P5Q8NFI4 369 aaPredicted RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 ATXN2LQ8WWM7 1075 aaKnown RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 HTR3CQ8WXA8 447 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 RSAD2Q8WXG1 361 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 MAML1Q92585 1016 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 FATE1Q969F0 183 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PPP2R3CQ969Q6 453 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 VOPP1Q96AW1 172 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 GRAMD1AQ96CP6 724 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 PABPC5Q96DU9 382 aaKnown RBP7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 CHFRQ96EP1 664 aa7.15□□□□□ -1.27
HMGCS2-204ENST00000544913 SGSM3Q96HU1 749 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms