RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 VOPP1Q96AW1 172 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 C2orf49Q9BVC5 232 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ACE2Q9BYF1 805 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SLC32A1Q9H598 525 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GAREM1Q9H706 876 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ARHGAP20Q9P2F6 1191 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR12D3Q9UGF7 316 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 MYO6Q9UM54 1294 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SNX11Q9Y5W9 270 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ITPR1Q14643 2758 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM47DPA6NHR8 397 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LRRC72A6NJI9 287 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LATO43561 262 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 WNT1P04628 370 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FERP16591 822 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RRM1P23921 792 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR1E1P30953 314 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF165P49910 485 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TAS2R38P59533 333 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RPL7AP62424 266 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KRT83P78385 493 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SCAPQ12770 1279 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NR1I3Q14994 352 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ACCSLQ4AC99 568 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 AGBL4Q5VU57 503 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 IL27RAQ6UWB1 636 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR14C36Q8NHC7 312 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 BAHD1Q8TBE0 780 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TTYH3Q9C0H2 523 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TAS2R14Q9NYV8 317 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PCDHGB2Q9Y5G2 931 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
TNFRSF1A-215ENST00000543359 A0A1W2PQC6 194 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 A0A1W2PR77 199 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KCNK3O14649 394 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PLRG1O43660 514 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RTN2O75298 545 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LRIG2O94898 1065 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CER1O95813 267 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PLEKP08567 350 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RHOQP17081 205 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GPD1P21695 349 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CLCN6P51797 869 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF143P52747 638 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PPP2CBP62714 309 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PPP2CAP67775 309 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SIM1P81133 766 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ARF5P84085 180 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GNA12Q03113 381 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF423Q2M1K9 1284 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NAXDQ8IW45 347 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 MCOLN2Q8IZK6 566 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ATP11CQ8NB49 1132 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CHST14Q8NCH0 376 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RETREG1Q9H6L5 497 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TM7SF3Q9NS93 570 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PCOLCE2Q9UKZ9 415 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ACTL7AQ9Y615 435 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ARID1BQ8NFD5 2236 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 VILLO15195 856 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SLC7A4O43246 635 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CCP110O43303 1012 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SPINK2P20155 84 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CHRNA3P32297 505 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ACVRL1P37023 503 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OGDHQ02218 1023 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SLC20A2Q08357 652 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FOXC1Q12948 553 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 HNRNPDQ14103 355 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TEAD4Q15561 434 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ARL13BQ3SXY8 428 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 POM121L1PQ3SYA9 428 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM46CQ5VWP2 391 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 DSG4Q86SJ6 1040 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PYROXD2Q8N2H3 581 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TMIEQ8NEW7 156 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SPON2Q9BUD6 331 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SELENOOQ9BVL4 669 aa13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TMEM121BQ9BXQ6 578 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KDM4CQ9H3R0 1056 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms