RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 SEMA3BQ13214 749 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 SNAPC2Q13487 334 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 SLC9B1Q4ZJI4 515 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 PCID2Q5JVF3 399 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 VWA5B1Q5TIE3 1220 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 ARPINQ7Z6K5 226 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 DSELQ8IZU8 1212 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 TNS4Q8IZW8 715 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 PPHLN1Q8NEY8 458 aaKnown RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 TEKT5Q96M29 485 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 HAPLN3Q96S86 360 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 KIFC1Q9BW19 673 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 EIF2AQ9BY44 585 aaKnown RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 IARS2Q9NSE4 1012 aaKnown RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 ETAA1Q9NY74 926 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 NCKIPSDQ9NZQ3 722 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 COX16Q9P0S2 106 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 FBXW11Q9UKB1 542 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 SLC39A10Q9ULF5 831 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 PIN4Q9Y237 131 aaKnown RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 GINS2Q9Y248 185 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 ACOT9Q9Y305 439 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 PTCH2Q9Y6C5 1203 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 EME2A4GXA9 379 aaPredicted RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 H0YJX3 145 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 AIM2O14862 343 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 ZBTB7AO95365 584 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 PIGNO95427 931 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 LMO2P25791 158 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 LRPAP1P30533 357 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 RPL5P46777 297 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 GRIA4P48058 902 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 SLC12A2P55011 1212 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 DAOAP59103 153 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 FOLH1Q04609 750 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 ADGRE1Q14246 886 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 MARCH8Q5T0T0 291 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 OTUD1Q5VV17 481 aaPredicted RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 LPCAT4Q643R3 524 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 IQSEC1Q6DN90 963 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 CES3Q6UWW8 571 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 AHI1Q8N157 1196 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 LZTR1Q8N653 840 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 STYXQ8WUJ0 223 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 IRGQQ8WZA9 623 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 ATXN7L3BQ96GX2 97 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 TSGA13Q96PP4 275 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 GORASP1Q9BQQ3 440 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 PRKD2Q9BZL6 878 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 FAM49AQ9H0Q0 323 aaPredicted RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 NXF3Q9H4D5 531 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 EML4Q9HC35 981 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 PIGVQ9NUD9 493 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 PIH1D1Q9NWS0 290 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 CNOT11Q9UKZ1 510 aaKnown RBP6.9□□□□□ -1.31
NKRF-204ENST00000542113 INPP5FQ9Y2H2 1132 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 OTOFQ9HC10 1997 aa6.9□□□□□ -1.31
NKRF-204ENST00000542113 ARHGAP10A1A4S6 786 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 H3BNX3 289 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 UPP2O95045 317 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 STMN1P16949 149 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 NFKB1P19838 968 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 GEMP55040 296 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 STX5Q13190 355 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MSLNQ13421 630 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 IRF5Q13568 498 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PSMD5Q16401 504 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 LRRC36Q1X8D7 754 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 LSM12Q3MHD2 195 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DCLRE1AQ6PJP8 1040 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 POTEHQ6S545 545 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MAMDC4Q6UXC1 1216 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 CLEC20AQ6ZU45 233 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ZC3HC1Q86WB0 502 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 CNTN4Q8IWV2 1026 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 KLHDC8BQ8IXV7 354 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 HIPK4Q8NE63 616 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 NAT14Q8WUY8 206 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DCUN1D1Q96GG9 259 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DDX50Q9BQ39 737 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 SHCBP1LQ9BZQ2 653 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MRPL46Q9H2W6 279 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 ABHD16BQ9H3Z7 469 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PIDD1Q9HB75 910 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ZNF358Q9NW07 568 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DDIT4Q9NX09 232 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PADI4Q9UM07 663 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 SCN1AP35498 2009 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 PDLIM1O00151 329 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms