RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SIPA1Q96FS4 1042 aa18.26■□□□□ 0.51
DDX55-204ENST00000536079 RSPH9Q9H1X1 276 aaPredicted RBP18.26■□□□□ 0.51
DDX55-204ENST00000536079 USP36Q9P275 1121 aaKnown RBP18.26■□□□□ 0.51
DDX55-204ENST00000536079 LCMT1Q9UIC8 334 aa18.26■□□□□ 0.51
DDX55-204ENST00000536079 SARDHQ9UL12 918 aa18.26■□□□□ 0.51
DDX55-204ENST00000536079 CYP8B1Q9UNU6 501 aa18.26■□□□□ 0.51
DDX55-204ENST00000536079 FRYLO94915 3013 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 GPR179Q6PRD1 2367 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 IGHV1OR15-9A0A0B4J2B8 117 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 BTNL10A8MVZ5 291 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 GOLGA6L6A8MZA4 724 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 BNIP3LO60238 219 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 CTSLP07711 333 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 KDELR1P24390 212 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 CNR2P34972 360 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 PLA2G5P39877 138 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 ARL4AP40617 200 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 MARCKSL1P49006 195 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 TPMTP51580 245 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 NDST2P52849 883 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 YBEYP58557 167 aaPredicted RBP18.25■□□□□ 0.51
DDX55-204ENST00000536079 PLK5Q496M5 336 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 CEP68Q76N32 757 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 KIAA1328Q86T90 577 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 DEFB119Q8N690 84 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 PQLC3Q8N755 202 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 CHST14Q8NCH0 376 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 OR2A12Q8NGT7 310 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 PRCCQ92733 491 aaPredicted RBP18.25■□□□□ 0.51
DDX55-204ENST00000536079 VOPP1Q96AW1 172 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 DUSP15Q9H1R2 295 aaPredicted RBP18.25■□□□□ 0.51
DDX55-204ENST00000536079 PDFQ9HBH1 243 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 ITM2CQ9NQX7 267 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 SERGEFQ9UGK8 458 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 SMG5Q9UPR3 1016 aaKnown RBP18.25■□□□□ 0.51
DDX55-204ENST00000536079 ADGRG1Q9Y653 693 aa18.25■□□□□ 0.51
DDX55-204ENST00000536079 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 PLK4O00444 970 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 KRT7P08729 469 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 NNMTP40261 264 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 SLC1A1P43005 524 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 ZNF135P52742 658 aaPredicted RBP18.24■□□□□ 0.51
DDX55-204ENST00000536079 PARP15Q460N3 678 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 ANKRD20A8PQ5CZ79 823 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 RETSATQ6NUM9 610 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 C22orf39Q6P5X5 142 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 METTL3Q86U44 580 aaKnown RBP18.24■□□□□ 0.51
DDX55-204ENST00000536079 ZNF354CQ86Y25 554 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 KRT35Q92764 455 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 NKD2Q969F2 451 aaPredicted RBP18.24■□□□□ 0.51
DDX55-204ENST00000536079 FAF2Q96CS3 445 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 FAM122AQ96E09 287 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
DDX55-204ENST00000536079 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
DDX55-204ENST00000536079 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 DFFAO00273 331 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 MID1O15344 667 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 SPOPO43791 374 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 IPO7O95373 1038 aaKnown RBP18.23■□□□□ 0.51
DDX55-204ENST00000536079 LMNAP02545 664 aaKnown RBP18.23■□□□□ 0.51
DDX55-204ENST00000536079 GKP32189 559 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 ETFBP38117 255 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 PSMD8P48556 350 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 MRE11P49959 708 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 PDK2Q15119 407 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 CYTH1Q15438 398 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 POM121L1PQ3SYA9 428 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 ZNF776Q68DI1 518 aaPredicted RBP18.23■□□□□ 0.51
DDX55-204ENST00000536079 NCBP2-AS2Q69YL0 99 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 C11orf63Q6NUN7 778 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 DPY19L3Q6ZPD9 716 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 FAM124AQ86V42 546 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 AADATQ8N5Z0 425 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 LRRN4Q8WUT4 740 aa18.23■□□□□ 0.51
DDX55-204ENST00000536079 RNF25Q96BH1 459 aaPredicted RBP18.23■□□□□ 0.51
DDX55-204ENST00000536079 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 LRRD1A4D1F6 860 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 MCF2LO15068 1137 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 ZBTB24O43167 697 aaPredicted RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 MFSD11O43934 449 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 PRAMEF11O60813 436 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 TMCC1O94876 653 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 MAP3K6O95382 1288 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 KRT1P04264 644 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 DNA2P51530 1060 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 CLCN6P51797 869 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 SLC20A2Q08357 652 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 SLC10A2Q12908 348 aaPredicted RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 ELAVL3Q14576 367 aaKnown RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 LLGL1Q15334 1064 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 CST6Q15828 149 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 ATXN7L2Q5T6C5 722 aaPredicted RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 LRRC38Q5VT99 294 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 TMCO3Q6UWJ1 677 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 DAAM2Q86T65 1068 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 RHOT1Q8IXI2 618 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 TMEFF1Q8IYR6 380 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 DCLK2Q8N568 766 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms