RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 TTC30BQ8N4P2 665 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SNX27Q96L92 541 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 KCTD15Q96SI1 283 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SH3GL3Q99963 347 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 CATSPERZQ9NTU4 200 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 NDUFAF1Q9Y375 327 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 BPGMP07738 259 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 MAPK1P28482 360 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 IRX1P78414 480 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 HIST2H2ACQ16777 129 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 TEX44Q53QW1 395 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 HIST2H2AA3Q6FI13 130 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 CMC1Q7Z7K0 106 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 GFM2Q969S9 779 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 QKIQ96PU8 341 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 COG4Q9H9E3 785 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 PLLPQ9Y342 182 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 FOXO6A8MYZ6 492 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 BTN3A1O00481 513 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 HNRNPRO43390 633 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 CCNG1P51959 295 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RAB10P61026 200 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RGMBQ6NW40 437 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 PKN3Q6P5Z2 889 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 TNS4Q8IZW8 715 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 OR56A4Q8NGH8 313 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 KCTD4Q8WVF5 259 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 MCRS1Q96EZ8 462 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 BORCS6Q96GS4 357 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 ACOX2Q99424 681 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SPASTQ9UBP0 616 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 GLTPD2A6NH11 291 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RAD51BO15315 384 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 ENTPD5O75356 428 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RAG1P15918 1043 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SMPD1P17405 629 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 GPD2P43304 727 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 GRIA4P48058 902 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RIPOR1Q6ZS17 1223 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 MON1AQ86VX9 555 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 HORMAD1Q86X24 394 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SH3GL1Q99961 368 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 SEMA3CQ99985 751 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 ELOVL6Q9H5J4 265 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 ALG9Q9H6U8 611 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RMND5AQ9H871 391 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 RPL26L1Q9UNX3 145 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 FAM50BQ9Y247 325 aa15.53■□□□□ 0.08
PCDHA3-202ENST00000532566 CCDC88AQ3V6T2 1871 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 TMEM114B3SHH9 223 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 MZF1P28698 734 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 LILRA4P59901 499 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 SLC25A3Q00325 362 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 GDPD5Q8WTR4 605 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 LZICQ8WZA0 190 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 ZCWPW1Q9H0M4 648 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 RAP2CQ9Y3L5 183 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 MYH10P35580 1976 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 KRT6AP02538 564 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 KRT6BP04259 564 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 SERPINA6P08185 405 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 ITGB6P18564 788 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 CYP3A5P20815 502 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 FMO4P31512 558 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 KRT6CP48668 564 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 BTG3Q14201 252 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 LACTB2Q53H82 288 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 PRMT9Q6P2P2 845 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 METTL6Q8TCB7 284 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 NDRG1Q92597 394 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 ZNF184Q99676 751 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 ZNF556Q9HAH1 456 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 ARHGEF4Q9NR80 690 aa15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 UXTQ9UBK9 157 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-202ENST00000532566 C5orf60A6NFR6 353 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 BUD23O43709 281 aaKnown RBP15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 FCGR1AP12314 374 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 CACNA2D1P54289 1103 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 CTBP1Q13363 440 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 FRG1Q14331 258 aaKnown RBP15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 ADRM1Q16186 407 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 TBCELQ5QJ74 424 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 ANKS1BQ7Z6G8 1248 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 SLC35B2Q8TB61 432 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 NMRK1Q9NWW6 199 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 MYH3P11055 1940 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 MYH8P13535 1937 aa15.52■□□□□ 0.07
PCDHA3-202ENST00000532566 USP1O94782 785 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PREPLQ4J6C6 727 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SAMD4BQ5PRF9 694 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 IYDQ6PHW0 289 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 MIER2Q8N344 545 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 FNDC5Q8NAU1 212 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 OR6Y1Q8NGX8 325 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 RDH11Q8TC12 318 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 FTHL17Q9BXU8 183 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms