RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 VOPP1Q96AW1 172 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 DNAJC7Q99615 494 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 ORAI3Q9BRQ5 295 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 C2orf49Q9BVC5 232 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 EBF2Q9HAK2 575 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 CAPN10Q9HC96 672 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 TMEM51Q9NW97 253 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 AP4E1Q9UPM8 1137 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 MFHAS1Q9Y4C4 1052 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 BZW2Q9Y6E2 419 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 MEI4A8MW99 385 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 C10orf142B7Z368 130 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 TM4SF5O14894 197 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 RNASEH2AO75792 299 aaKnown RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 CYP1A2P05177 515 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 IGHV4-34P06331 123 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 ENGP17813 658 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 GKP32189 559 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 MAPK8P45983 427 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 SERPINH1P50454 418 aaKnown RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 BNC1Q01954 994 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 ZBTB16Q05516 673 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 TBX2Q13207 712 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 ELAVL3Q14576 367 aaKnown RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.234e-7■■■□□ 16.2
VEGFA-219ENST00000518824 ACBD5Q5T8D3 534 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 C22orf39Q6P5X5 142 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 SLC23A3Q6PIS1 610 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 NCEH1Q6PIU2 408 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 TP53INP2Q8IXH6 220 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 RTL3Q8N8U3 475 aaKnown RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 FNIP1Q8TF40 1166 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 SNX19Q92543 992 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 BIRC7Q96CA5 298 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 PPP1R9BQ96SB3 815 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 BTBD1Q9H0C5 482 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 MIR1-1HGQ9H1L0 117 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-219ENST00000518824 PPM1HQ9ULR3 514 aa13.6□□□□□ -0.23
VEGFA-219ENST00000518824 WNT9AO14904 365 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 MCF2LO15068 1137 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 RNASEH1O60930 286 aaKnown RBP13.59□□□□□ -0.23
VEGFA-219ENST00000518824 MFAP3LO75121 409 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 FSBPO95073 299 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 TPM3P06753 285 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 MYBL1P10243 752 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 GOT1P17174 413 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 C5AR1P21730 350 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 PPP2CBP62714 309 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 PPP2CAP67775 309 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 DUOXA1Q1HG43 343 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-219ENST00000518824 KCNT1Q5JUK3 1230 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 DPY19L3Q6ZPD9 716 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 USP30Q70CQ3 517 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 OR8D1Q8WZ84 308 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 FOXJ1Q92949 421 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 CELF6Q96J87 481 aaKnown RBP13.59□□□□□ -0.23
VEGFA-219ENST00000518824 OMDQ99983 421 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 ABHD10Q9NUJ1 306 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-219ENST00000518824 SCINQ9Y6U3 715 aa13.59□□□□□ -0.23
VEGFA-219ENST00000518824 ASCC3Q8N3C0 2202 aaKnown RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 MED19A0JLT2 244 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 WASH4PA8MWX3 477 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 RASA4BC9J798 803 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 RASA4O43374 803 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 RAMP2O60895 175 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 RNF8O76064 485 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 ADH1BP00325 375 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 SERPINF2P08697 491 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 CHRNA3P32297 505 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 LIMK1P53667 647 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 ADPRHP54922 357 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 TAS2R38P59533 333 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 TPI1P60174 286 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 CNTN1Q12860 1018 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 POLD3Q15054 466 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 ARSIQ5FYB1 569 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 KIAA0895LQ68EN5 471 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 SARM1Q6SZW1 724 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms