RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 NRSN1Q8IZ57 195 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 CLEC4FQ8N1N0 589 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 FAM26EQ8N5C1 309 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 ARFGAP1Q8N6T3 406 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 FSIP1Q8NA03 581 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 URGCPQ8TCY9 931 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 C12orf57Q99622 126 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 ECSITQ9BQ95 431 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 CABP5Q9NP86 173 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 LRFN2Q9ULH4 789 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 RUVBL1Q9Y265 456 aaKnown RBP11.46□□□□□ -0.58
MACF1-225ENST00000497807 MAN2B2Q9Y2E5 1009 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 USP15Q9Y4E8 981 aaPredicted RBP11.46□□□□□ -0.58
MACF1-225ENST00000497807 CSADQ9Y600 493 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 RAD54BQ9Y620 910 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 NEDD4P46934 1319 aa11.46□□□□□ -0.58
MACF1-225ENST00000497807 PMS2P1A4D2B8 440 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 GJB6O95452 261 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 VGLL4Q14135 290 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SUSD1Q6UWL2 747 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 FIBCD1Q8N539 461 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 PLD5Q8N7P1 536 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 ZNF461Q8TAF7 563 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 PKP4Q99569 1192 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 POLR3BQ9NW08 1133 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 WWOXQ9NZC7 414 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 PRKAG3Q9UGI9 489 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 CD300AQ9UGN4 299 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SALL4Q9UJQ4 1053 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SSC5DA1L4H1 1573 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 COL2A1P02458 1487 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 NPHP3-ACAD11A0A0J9YXS1 232 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SERTM1A2A2V5 107 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SUN1O94901 812 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 OPN1MWP04001 364 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 CYP2A6P11509 494 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 NCF2P19878 526 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 CDK9P50750 372 aaKnown RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 DLG4P78352 724 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 COL9A3Q14050 684 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 PAPD7Q5XG87 772 aaKnown RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 HTR3DQ70Z44 454 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 FBXO15Q8NCQ5 510 aaPredicted RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 TMIEQ8NEW7 156 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 ZNF507Q8TCN5 953 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 ESR2Q92731 530 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 CNPY3Q9BT09 278 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 MROQ9BYG7 248 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 MRPS26Q9BYN8 205 aaKnown RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 TRIT1Q9H3H1 467 aaKnown RBP11.45□□□□□ -0.58
MACF1-225ENST00000497807 ELP3Q9H9T3 547 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 SPACA1Q9HBV2 294 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 TM9SF3Q9HD45 589 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 IGSF9Q9P2J2 1179 aa11.45□□□□□ -0.58
MACF1-225ENST00000497807 A0A1W2PQ72 361 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 PLK4O00444 970 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 FPGTO14772 594 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 TP73O15350 636 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 CCNKO75909 580 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 KRT19P08727 400 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 NR4A1P22736 598 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 POLR2BP30876 1174 aaKnown RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 CDK16Q00536 496 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 TFDP1Q14186 410 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 PFKFB4Q16877 469 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 Q8N9G6 341 aaPredicted RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 DDX1Q92499 740 aaKnown RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 C19orf60Q96EN9 201 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 CAMK1GQ96NX5 476 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 SNX18Q96RF0 628 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 TLE6Q9H808 572 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 RSL24D1Q9UHA3 163 aaKnown RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
MACF1-225ENST00000497807 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 TRAFD1O14545 582 aaPredicted RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 BACH1O14867 736 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 THAP12O43422 761 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 SLITRK5O94991 958 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 XPAP23025 273 aaPredicted RBP11.44□□□□□ -0.58
MACF1-225ENST00000497807 TPTEP56180 551 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 FKBP1BP68106 108 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 HTRA3P83110 453 aa11.44□□□□□ -0.58
MACF1-225ENST00000497807 MED21Q13503 144 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms