RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ALKBH5Q6P6C2 394 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 FAM183BPQ6ZVS7 135 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 GAREM2Q75VX8 874 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 GPRIN1Q7Z2K8 1008 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 PHF13Q86YI8 300 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TMTC1Q8IUR5 882 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 YAF2Q8IY57 180 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CCDC170Q8IYT3 715 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SHISA5Q8N114 240 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MAB21L3Q8N8X9 362 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 TC2NQ8N9U0 490 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ITFG1Q8TB96 612 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ING5Q8WYH8 240 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 FGF13Q92913 245 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MCRS1Q96EZ8 462 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SGSM3Q96HU1 749 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 RPGRIP1Q96KN7 1286 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ASB2Q96Q27 587 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CPXM1Q96SM3 734 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 BAG1Q99933 345 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 C11orf70Q9BRQ4 267 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 NHEJ1Q9H9Q4 299 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 POPDC2Q9HBU9 364 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 LRRC4CQ9HCJ2 640 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 MRPL47Q9HD33 250 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ASNSD1Q9NWL6 643 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 RRN3Q9NYV6 651 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CHORDC1Q9UHD1 332 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 LSM7Q9UK45 103 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 STAP1Q9ULZ2 295 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 SCINQ9Y6U3 715 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 CDH23Q9H251 3354 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 HELZP42694 1942 aaKnown RBP6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ANAPC1Q9H1A4 1944 aa6.42□□□□□ -1.38
SF3B1-209ENST00000479532 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 H0YHG0 523 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 GOLGA8SH3BPF8 625 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 DDX3XO00571 662 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 PAPSS1O43252 624 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 DAB1O75553 588 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 FTLP02792 175 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ERBB2P04626 1255 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZDHHC11BP0C7U3 371 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 NAT2P11245 290 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 LAMP2P13473 410 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 NCAM1P13591 858 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 IL9P15248 144 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 GJA1P17302 382 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SP100P23497 879 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CCR2P41597 374 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF143P52747 638 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 YWHAZP63104 245 aaKnown RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 RNF4P78317 190 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 COG7P83436 770 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SLC18A3Q16572 532 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SLC5A9Q2M3M2 681 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 MAP9Q49MG5 647 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 PTPN20Q4JDL3 420 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 BSPRYQ5W0U4 402 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 E4F1Q66K89 784 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 TXNDC8Q6A555 127 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CC2D1AQ6P1N0 951 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 DCUN1D2Q6PH85 259 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 KLHDC10Q6PID8 442 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SEZ6L2Q6UXD5 910 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 BEND5Q7L4P6 421 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SPATS2Q86XZ4 545 aaKnown RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ADHFE1Q8IWW8 467 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 C10orf67Q8IYJ2 551 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 MCOLN2Q8IZK6 566 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZDHHC14Q8IZN3 488 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CMTM8Q8IZV2 173 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF276Q8N554 614 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 WDTC1Q8N5D0 677 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CELF5Q8N6W0 485 aaKnown RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 GPATCH11Q8N954 259 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 C3orf20Q8ND61 904 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SLC30A5Q8TAD4 765 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CTNNBL1Q8WYA6 563 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SMARCD2Q92925 531 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF653Q96CK0 615 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 TCEAL4Q96EI5 215 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SERPINB11Q96P15 392 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 PCDHB18PQ96TA0 734 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 SPATA9Q9BWV2 254 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 KLHL25Q9H0H3 589 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ZFP14Q9HCL3 533 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 PARVAQ9NVD7 372 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 THG1LQ9NWX6 298 aaKnown RBP6.41□□□□□ -1.38
SF3B1-209ENST00000479532 OBP2AQ9NY56 170 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 ARHGAP20Q9P2F6 1191 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 EPS15L1Q9UBC2 864 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 CYTH4Q9UIA0 394 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 LCMT1Q9UIC8 334 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 RASAL2Q9UJF2 1139 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms