RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DOCK9Q9BZ29 2069 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 KRTAP9-6A0A140TA67 174 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 KCNU1A8MYU2 1149 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 EIF3CLB5ME19 914 aaKnown RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 I6L893 689 aaPredicted RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 ENDOD1O94919 500 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 NDUFA10O95299 355 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 LCA5LO95447 670 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 F9P00740 461 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 TMEM253P0C7T8 217 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 HLA-EP13747 358 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 PMLP29590 882 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 HLA-FP30511 346 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 SLC11A2P49281 568 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 HDAC4P56524 1084 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 RPL6Q02878 288 aaKnown RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ZNF234Q14588 700 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 BRMS1LQ5PSV4 323 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ADGRF1Q5T601 910 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 PIK3R6Q5UE93 754 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 LYSMD4Q5XG99 296 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 RAP1GAP2Q684P5 730 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 PSAPL1Q6NUJ1 521 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 KIAA1324Q6UXG2 1013 aaKnown RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 CHSY1Q86X52 802 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 CACUL1Q86Y37 369 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 CCDC170Q8IYT3 715 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ZNF366Q8N895 744 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 OR2I1PQ8NGU4 316 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 DDI1Q8WTU0 396 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 BTBD6Q96KE9 485 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 BTN2A3PQ96KV6 586 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 PRICKLE1Q96MT3 831 aaPredicted RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 EIF3CQ99613 913 aaKnown RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 TKTL2Q9H0I9 626 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 WDCPQ9H6R7 721 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ANLNQ9NQW6 1124 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 ARHGEF38Q9NXL2 777 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 CTTNBP2NLQ9P2B4 639 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 EVLQ9UI08 416 aaPredicted RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 ANAPC7Q9UJX3 599 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 STOML2Q9UJZ1 356 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
SMC4-213ENST00000472282 EPN1Q9Y6I3 576 aaPredicted RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 CNOT1A5YKK6 2376 aaKnown RBP9.41□□□□□ -0.9
SMC4-213ENST00000472282 PCNX2A6NKB5 2137 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 PAGE1O75459 146 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 TOP3BO95985 862 aaKnown RBP9.4□□□□□ -0.9
SMC4-213ENST00000472282 CYBBP04839 570 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 DESP17661 470 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 ENGP17813 658 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 TACR2P21452 398 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 MAOBP27338 520 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 MAGEA1P43355 309 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 MAPK8P45983 427 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 COPAP53621 1224 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 CLN3Q13286 438 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SPA17Q15506 151 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 DBN1Q16643 649 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 UAP1L1Q3KQV9 507 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 MPPE1Q53F39 396 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 DAB2IPQ5VWQ8 1189 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SDE2Q6IQ49 451 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SCYL2Q6P3W7 929 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SLC23A3Q6PIS1 610 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 LGI2Q8N0V4 545 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 CCDC185Q8N715 623 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 ACRBPQ8NEB7 543 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 CENPIQ92674 756 aaPredicted RBP9.4□□□□□ -0.9
SMC4-213ENST00000472282 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.9
SMC4-213ENST00000472282 HSPA12BQ96MM6 686 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 DDX50Q9BQ39 737 aaKnown RBP9.4□□□□□ -0.9
SMC4-213ENST00000472282 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SIK2Q9H0K1 926 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 OSGEPQ9NPF4 335 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 TMEM9BQ9NQ34 198 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 ELOVL2Q9NXB9 296 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 INTUQ9ULD6 942 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 TFR2Q9UP52 801 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 SNX10Q9Y5X0 201 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
SMC4-213ENST00000472282 TYW5A2RUC4 315 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 F5H5T6 163 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 TBL1XO60907 577 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 RNF8O76064 485 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 IPO7O95373 1038 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 CFIP05156 583 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 CD70P32970 193 aa9.39□□□□□ -0.91
SMC4-213ENST00000472282 NOVA1P51513 510 aaKnown RBP9.39□□□□□ -0.91
SMC4-213ENST00000472282 RPS24P62847 133 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms