RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SLC10A7Q0GE19 358 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 AHI1Q8N157 1196 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 CCDC110Q8TBZ0 833 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 MAML1Q92585 1016 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 DNASE1L2Q92874 299 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 PNKPQ96T60 521 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 TRIM51Q9BSJ1 452 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 C2orf49Q9BVC5 232 aaPredicted RBP19.58■□□□□ 0.72
PSPC1-203ENST00000471658 NEU2Q9Y3R4 380 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 PIAS3Q9Y6X2 628 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 COL4A2P08572 1712 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 TCF20Q9UGU0 1960 aaKnown RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 RNF103O00237 685 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 ECEL1O95672 775 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 POLR2EP19388 210 aaKnown RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 STIP1P31948 543 aaKnown RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 CTHP32929 405 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 STK19P49842 368 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 SLC7A5Q01650 507 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 ZNF33AQ06730 810 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 TIGD7Q6NT04 549 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 ZNF567Q8N184 647 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 TAB3Q8N5C8 712 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 CNTD1Q8N815 330 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 CYB5D2Q8WUJ1 264 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 TTC17Q96AE7 1141 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 IL12RB2Q99665 862 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 CIPCQ9C0C6 399 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 SLC2A4RGQ9NR83 387 aa19.57■□□□□ 0.72
PSPC1-203ENST00000471658 UBA2Q9UBT2 640 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-203ENST00000471658 MIA3Q5JRA6 1907 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 CFAP69A5D8W1 941 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 TBC1D3BA6NDS4 549 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 SMAD6O43541 496 aaKnown RBP19.56■□□□□ 0.72
PSPC1-203ENST00000471658 KAT7O95251 611 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 KRT14P02533 472 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 VPS41P49754 854 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
PSPC1-203ENST00000471658 DMC1Q14565 340 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 LBRQ14739 615 aaKnown RBP19.56■□□□□ 0.72
PSPC1-203ENST00000471658 CYTH1Q15438 398 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 SLC44A4Q53GD3 710 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 JAMLQ86YT9 394 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 RNF135Q8IUD6 432 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 TERB1Q8NA31 727 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 AGAP3Q96P47 875 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 P2RY13Q9BPV8 354 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 CD320Q9NPF0 282 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 RBM22Q9NW64 420 aaKnown RBP eCLIP19.56■□□□□ 0.72
PSPC1-203ENST00000471658 ELOVL2Q9NXB9 296 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 DUSP12Q9UNI6 340 aa19.56■□□□□ 0.72
PSPC1-203ENST00000471658 SHISA7A6NL88 538 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 F5H423 210 aaPredicted RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 ZBTB24O43167 697 aaPredicted RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 RPL22P35268 128 aaKnown RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 EIF2DP41214 584 aaKnown RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 LMNB2Q03252 620 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 HNRNPDQ14103 355 aaKnown RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 PON2Q15165 354 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 TEX44Q53QW1 395 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 TEX35Q5T0J7 233 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 MARC1Q5VT66 337 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 PGBD5Q8N414 524 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 TEX26Q8N6G2 289 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 CCDC26Q8TAB7 109 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 WFIKKN2Q8TEU8 576 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 GRK7Q8WTQ7 553 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 EZH1Q92800 747 aaPredicted RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 ACDQ96AP0 544 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 RTP4Q96DX8 246 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 SLCO3A1Q9UIG8 710 aa19.55■□□□□ 0.72
PSPC1-203ENST00000471658 FCF1Q9Y324 198 aaKnown RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 V9GYY5 206 aaPredicted RBP19.55■□□□□ 0.72
PSPC1-203ENST00000471658 TTC24A2A3L6 582 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 C5orf60A6NFR6 353 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 MUSKO15146 869 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 CD72P21854 359 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TERF1P54274 439 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ECT2LQ008S8 904 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 PFKPQ01813 784 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 DHX34Q14147 1143 aaKnown RBP19.54■□□□□ 0.72
PSPC1-203ENST00000471658 PPP1R7Q15435 360 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ANKRD20A2Q5SQ80 823 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 TMCO4Q5TGY1 634 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ANKRD20A1Q5TYW2 823 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ANKRD20A3Q5VUR7 823 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RETSATQ6NUM9 610 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 C8orf74Q6P047 294 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 PID1Q7Z2X4 250 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 CCDC89Q8N998 374 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 SLCO2A1Q92959 643 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 FATE1Q969F0 183 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 MRGPRX3Q96LB0 322 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 RUNDC3BQ96NL0 473 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 ZNF599Q96NL3 588 aa19.54■□□□□ 0.72
PSPC1-203ENST00000471658 EPC1Q9H2F5 836 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms