RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 DCAF4L2Q8NA75 395 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 FGF14Q92915 247 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 ATP2A3Q93084 1043 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 HLA-CQ95604 372 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 TTC17Q96AE7 1141 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 CHFRQ96EP1 664 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 CELF6Q96J87 481 aaKnown RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 TEKT5Q96M29 485 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 FAM161BQ96MY7 647 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 SPSB2Q99619 263 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 PHF7Q9BWX1 381 aaPredicted RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 RAB17Q9H0T7 212 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 ZDHHC18Q9NUE0 388 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 THG1LQ9NWX6 298 aaKnown RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 DUS2Q9NX74 493 aaKnown RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 WHRNQ9P202 907 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 KIAA1522Q9P206 1035 aaPredicted RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 PAK5Q9P286 719 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 IPO11Q9UI26 975 aaKnown RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 TRHDEQ9UKU6 1024 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 INTS6Q9UL03 887 aaKnown RBP8.33□□□□□ -1.08
NPHP3-204ENST00000469232 CLEC4EQ9ULY5 219 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 ATP8A1Q9Y2Q0 1164 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 WNT6Q9Y6F9 365 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 KIAA1549LQ6ZVL6 1849 aa8.33□□□□□ -1.08
NPHP3-204ENST00000469232 A0A0D9SEW6 157 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 TYW5A2RUC4 315 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 H3BQ06 376 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 SEC31AO94979 1220 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 HEXIM1O94992 359 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ADH1CP00326 375 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 KRT14P02533 472 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CYBBP04839 570 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 TYRP14679 529 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 FOSL2P15408 326 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 HLA-FP30511 346 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CD68P34810 354 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 GAD2Q05329 585 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 SLC20A2Q08357 652 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 LMAN2Q12907 356 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 SEMA5AQ13591 1074 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CUL1Q13616 776 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PLEKHG6Q3KR16 790 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 HEATR6Q6AI08 1181 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CCDC70Q6NSX1 233 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ZDHHC24Q6UX98 284 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ATPAF2Q8N5M1 289 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 OR7D4Q8NG98 312 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 DDI1Q8WTU0 396 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CASKIN2Q8WXE0 1202 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ACDQ96AP0 544 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PNKPQ96T60 521 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 TRIM51Q9BSJ1 452 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PHACTR1Q9C0D0 580 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ECT2Q9H8V3 914 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 XIRP2A4UGR9 3374 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 OTOL1A6NHN0 477 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 LOC730098B7Z3J9 87 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 J3KR12 359 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RNF103O00237 685 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 DNALI1O14645 258 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 NDC80O14777 642 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 SCAMP3O14828 347 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 KCNN4O15554 427 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RHOCP08134 193 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ADH5P11766 374 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CCNB1P14635 433 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ETS1P14921 441 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ARSAP15289 507 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ITIH2P19823 946 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 KCNA5P22460 613 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 MZF1P28698 734 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RPL21P46778 160 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ARF5P84085 180 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ZBTB17Q13105 803 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RUNX3Q13761 415 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 NAA30Q147X3 362 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 PARP6Q2NL67 630 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ANO4Q32M45 955 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ANKRD20A2Q5SQ80 823 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RNASEH2BQ5TBB1 312 aaKnown RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ANKRD20A1Q5TYW2 823 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ANKRD20A3Q5VUR7 823 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 KCTD11Q693B1 232 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 CCNI2Q6ZMN8 369 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ADIPOR2Q86V24 386 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 HOOK3Q86VS8 718 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 MFN1Q8IWA4 741 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 KDM1BQ8NB78 822 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 NETO2Q8NC67 525 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 WFIKKN2Q8TEU8 576 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 RSAD2Q8WXG1 361 aa8.32□□□□□ -1.08
NPHP3-204ENST00000469232 ART4Q93070 314 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms