RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 MAP7D1Q3KQU3 841 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 Q6ZVU0 165 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 TSC1Q92574 1164 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 FAM122AQ96E09 287 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 FAM129BQ96TA1 746 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 SLC39A8Q9C0K1 460 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 SEMA4AQ9H3S1 761 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 ETNK2Q9NVF9 386 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 ALG6Q9Y672 507 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 ZNF292O60281 2723 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 DOCK9Q9BZ29 2069 aa12.65□□□□□ -0.39
CHPF2-202ENST00000465601 PJA2O43164 708 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 SPOPO43791 374 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 CD160O95971 181 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 BCKDHBP21953 392 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 P2RY2P41231 377 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 SERPINH1P50454 418 aaKnown RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 NDST2P52849 883 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 RPS14P62263 151 aaKnown RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 SERINC3Q13530 473 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 DPYSL3Q14195 570 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 PDK2Q15119 407 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 PARP15Q460N3 678 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 KBTBD6Q86V97 674 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 LRRC8AQ8IWT6 810 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 ARHGAP12Q8IWW6 846 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 TP53INP2Q8IXH6 220 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 NPWQ8N729 165 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 RSPH9Q9H1X1 276 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 FBRSQ9HAH7 460 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 CYP8B1Q9UNU6 501 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
CHPF2-202ENST00000465601 USP34Q70CQ2 3546 aa12.64□□□□□ -0.39
CHPF2-202ENST00000465601 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ARHGAP42A6NI28 874 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 BTNL10A8MVZ5 291 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 DFFAO00273 331 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 MAP3K13O43283 966 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ZNF217O75362 1048 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ACADMP11310 421 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 KDELR1P24390 212 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 PAPOLAP51003 745 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 DNA2P51530 1060 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 CLCN6P51797 869 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 PLK5Q496M5 336 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 AFMIDQ63HM1 303 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 MAP7D3Q8IWC1 876 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 RHOT1Q8IXI2 618 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 PCDH19Q8TAB3 1148 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 SPACA7Q96KW9 195 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 TNKS2Q9H2K2 1166 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ITM2CQ9NQX7 267 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 USP36Q9P275 1121 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 RCOR3Q9P2K3 495 aaPredicted RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 RAB23Q9ULC3 237 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
CHPF2-202ENST00000465601 ADGRG1Q9Y653 693 aa12.63□□□□□ -0.39
CHPF2-202ENST00000465601 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 J3KR12 359 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 MCF2LO15068 1137 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ARHGAP6O43182 974 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 DNTTP04053 509 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 PLA2G5P39877 138 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 PSMD8P48556 350 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 TPMTP51580 245 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ELAVL3Q14576 367 aaKnown RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ANKRD20A8PQ5CZ79 823 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 LRRC38Q5VT99 294 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 C11orf63Q6NUN7 778 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms