RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ARHGAP25P42331 645 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 PTGER3P43115 390 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 SERPINH1P50454 418 aaKnown RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 CLCN6P51797 869 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ZNF135P52742 658 aaPredicted RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 SERINC3Q13530 473 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ELAVL3Q14576 367 aaKnown RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 SPDYCQ5MJ68 293 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ZNF776Q68DI1 518 aaPredicted RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 Q6ZVU0 165 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 NPWQ8N729 165 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ATP11CQ8NB49 1132 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 SPC24Q8NBT2 197 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 HMCESQ96FZ2 354 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 CSPG4P5Q96PW8 444 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ETNK2Q9NVF9 386 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 LCMT1Q9UIC8 334 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 SARDHQ9UL12 918 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 RAB23Q9ULC3 237 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 PPM1HQ9ULR3 514 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 MFHAS1Q9Y4C4 1052 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 THADAQ6YHU6 1953 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 RHOBTB1O94844 696 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 CD48P09326 243 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 CD6P30203 668 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 NDST2P52849 883 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 METAP1P53582 386 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 MESDQ14696 234 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 CST6Q15828 149 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 PARP15Q460N3 678 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 ACCSLQ4AC99 568 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 PLA2G2CQ5R387 149 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 RETSATQ6NUM9 610 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 MMAAQ8IVH4 418 aaKnown RBP18.06■□□□□ 0.48
VPS52-214ENST00000463486 SLC41A1Q8IVJ1 513 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 TP53INP2Q8IXH6 220 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 TMEFF1Q8IYR6 380 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 HSPH1Q92598 858 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 FAM131CQ96AQ9 280 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 TOE1Q96GM8 510 aaKnown RBP18.06■□□□□ 0.48
VPS52-214ENST00000463486 ZNF419Q96HQ0 510 aaPredicted RBP18.06■□□□□ 0.48
VPS52-214ENST00000463486 SPACA7Q96KW9 195 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 SLC39A8Q9C0K1 460 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 PABPC3Q9H361 631 aaKnown RBP18.06■□□□□ 0.48
VPS52-214ENST00000463486 SERGEFQ9UGK8 458 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 SALL4Q9UJQ4 1053 aa18.06■□□□□ 0.48
VPS52-214ENST00000463486 BCLAF3A2AJT9 711 aaKnown RBP18.05■□□□□ 0.48
VPS52-214ENST00000463486 MID1O15344 667 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 CTSLP07711 333 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 AMPD1P23109 780 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 CYLC1P35663 651 aaPredicted RBP18.05■□□□□ 0.48
VPS52-214ENST00000463486 ELF2Q15723 593 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 C22orf39Q6P5X5 142 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 SLC36A4Q6YBV0 504 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 AADATQ8N5Z0 425 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 NETO2Q8NC67 525 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 CELF6Q96J87 481 aaKnown RBP18.05■□□□□ 0.48
VPS52-214ENST00000463486 BAG1Q99933 345 aaPredicted RBP18.05■□□□□ 0.48
VPS52-214ENST00000463486 CEP44Q9C0F1 390 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 PDFQ9HBH1 243 aa18.05■□□□□ 0.48
VPS52-214ENST00000463486 NYNRINQ9P2P1 1898 aaKnown RBP18.05■□□□□ 0.48
VPS52-214ENST00000463486 ALOX15BO15296 676 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 MAP3K13O43283 966 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 OXTRP30559 389 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 SLC8A1P32418 973 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 ACSL1P33121 698 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 DRD3P35462 400 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 RPL6Q02878 288 aaKnown RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 MMRN1Q13201 1228 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 DPYSL3Q14195 570 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 HADHQ16836 314 aaKnown RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 DPY19L3Q6ZPD9 716 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 USP30Q70CQ3 517 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 LPCAT2Q7L5N7 544 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 PLPP6Q8IY26 295 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 DEFB119Q8N690 84 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 CHST14Q8NCH0 376 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 ISG20Q96AZ6 181 aaKnown RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 ARRDC1-AS1Q9H2J1 176 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 TNKS2Q9H2K2 1166 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 TMEM74BQ9NUR3 256 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 RCOR3Q9P2K3 495 aaPredicted RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 NCDNQ9UBB6 729 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 SCML1Q9UN30 329 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 FCF1Q9Y324 198 aaKnown RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 PCDHGA5Q9Y5G8 931 aa18.04■□□□□ 0.48
VPS52-214ENST00000463486 TNRC6BQ9UPQ9 1833 aaKnown RBP18.04■□□□□ 0.48
VPS52-214ENST00000463486 A0A0A6YYK5 440 aaPredicted RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 TMEM110-MUSTN1A8MSY1 372 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 H3BRJ5 948 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 J3KR12 359 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 BUB1BO60566 1050 aaPredicted RBP18.03■□□□□ 0.48
VPS52-214ENST00000463486 LRP3O75074 770 aa18.03■□□□□ 0.48
VPS52-214ENST00000463486 DNTTP04053 509 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms