RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PIP4K2CQ8TBX8 421 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 FAM131CQ96AQ9 280 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 TBC1D31Q96DN5 1066 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 SLC6A18Q96N87 628 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 NAP1L5Q96NT1 182 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-204ENST00000462258 SPON2Q9BUD6 331 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 TTYH3Q9C0H2 523 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 GAREM1Q9H706 876 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 IL21RQ9HBE5 538 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 CBX8Q9HC52 389 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 TAS2R14Q9NYV8 317 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 OR12D3Q9UGF7 316 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 SARDHQ9UL12 918 aa10.41□□□□□ -0.74
SF3A3-204ENST00000462258 FNDC3AQ9Y2H6 1198 aaKnown RBP10.41□□□□□ -0.74
SF3A3-204ENST00000462258 A0A1W2PPC4 97 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TMCO5BA8MYB1 307 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 C10orf142B7Z368 130 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 FAM72CH0Y354 149 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 PLK4O00444 970 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 MCF2LO15068 1137 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 PLRG1O43660 514 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 LRIG2O94898 1065 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CTSLP07711 333 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 ZNF883P0CG24 379 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 RHOQP17081 205 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 DESP17661 470 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 PTMSP20962 102 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TNFAIP3P21580 790 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 ETFBP38117 255 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 SERPINH1P50454 418 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CCR5P51681 352 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 RPL7AP62424 266 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 RACK1P63244 317 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 ARF5P84085 180 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 KIF19Q2TAC6 998 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 HLA-BQ31612 363 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 FAM72AQ5TYM5 149 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 SFMBT2Q5VUG0 894 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 FAM72DQ6L9T8 149 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 RETSATQ6NUM9 610 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 DCUN1D2Q6PH85 259 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 SLFN11Q7Z7L1 901 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 LUZP1Q86V48 1076 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 NLRP14Q86W24 1093 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 FAM72BQ86X60 149 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 OR2A12Q8NGT7 310 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 GRIN3AQ8TCU5 1115 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CNTNAP3BQ96NU0 1288 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CNPY3Q9BT09 278 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CNTNAP3Q9BZ76 1288 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 CEP44Q9C0F1 390 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 OSBPL2Q9H1P3 480 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TNKS2Q9H2K2 1166 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 HAUS4Q9H6D7 363 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 NDFIP2Q9NV92 336 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TMEM248Q9NWD8 314 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 DNAI1Q9UI46 699 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 PPM1HQ9ULR3 514 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TPX2Q9ULW0 747 aaKnown RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-204ENST00000462258 SNX11Q9Y5W9 270 aa10.4□□□□□ -0.74
SF3A3-204ENST00000462258 TPRP12270 2363 aaKnown RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ASPMQ8IZT6 3477 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 MAP1BP46821 2468 aaKnown RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 KPNA3O00505 521 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 SH3BP5O60239 455 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 RAMP2O60895 175 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 RTN2O75298 545 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ZMPSTE24O75844 475 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PRNPP04156 253 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PLEKP08567 350 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 CHRNA3P32297 505 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ACVRL1P37023 503 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PRKCIP41743 596 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 RECQLP46063 649 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 CCT8P50990 548 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 AIF1P55008 147 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 C21orf59P57076 290 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 SIM1P81133 766 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 SHC2P98077 582 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 CNTN1Q12860 1018 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 HNRNPDQ14103 355 aaKnown RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 NR1I3Q14994 352 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 FIGNQ5HY92 759 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PIP5KL1Q5T9C9 394 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 SCYL2Q6P3W7 929 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ZNF571Q7Z3V5 609 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 TMC6Q7Z403 805 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 PCDH20Q8N6Y1 951 aaKnown RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 CHST14Q8NCH0 376 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 VCPIP1Q96JH7 1222 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 CAMK1GQ96NX5 476 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 EPAS1Q99814 870 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 ACE2Q9BYF1 805 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-204ENST00000462258 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
SF3A3-204ENST00000462258 RETREG1Q9H6L5 497 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms