RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 DTNBP1Q96EV8 351 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 SLC39A13Q96H72 371 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 PWWP2AQ96N64 755 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 SIKE1Q9BRV8 207 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 CAPN10Q9HC96 672 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 SIK3Q9Y2K2 1263 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 LRCH1Q9Y2L9 728 aa8.14□□□□□ -1.11
CNOT4-207ENST00000451834 UTP11Q9Y3A2 253 aaKnown RBP8.14□□□□□ -1.11
CNOT4-207ENST00000451834 BCLAF3A2AJT9 711 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 SFI1A8K8P3 1242 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 TISP43B9A030 160 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LEFTY2O00292 366 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ALOX15BO15296 676 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CST3P01034 146 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CFHP08603 1231 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 NAT2P11245 290 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 FOXN2P32314 431 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 PRKCIP41743 596 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ACOT2P49753 483 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LSAMPQ13449 338 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 AUHQ13825 339 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ASTE1Q2TB18 679 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ZNF362Q5T0B9 420 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 HS2ST1Q7LGA3 356 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 SLC15A3Q8IY34 581 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 RAVER1Q8IY67 606 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 MIPOL1Q8TD10 442 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ASB12Q8WXK4 309 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 MRPS31Q92665 395 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 MRRFQ96E11 262 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 RAB3IPQ96QF0 476 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 MIPEPQ99797 713 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 VCX3BQ9H321 246 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 VCX3AQ9NNX9 186 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 DOLKQ9UPQ8 538 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LAMA2P24043 3122 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CCNB1P14635 433 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CPB1P15086 417 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 GABRR2P28476 465 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 VHLP40337 213 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 GAD2Q05329 585 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 BTKQ06187 659 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ACAP1Q15027 740 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LIN52Q52LA3 116 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CLEC20AQ6ZU45 233 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 MAP7D3Q8IWC1 876 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 APOBEC3GQ9HC16 384 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 KRT82Q9NSB4 513 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 TJP2Q9UDY2 1190 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 PGRMC1O00264 195 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 RASGRF2O14827 1237 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 HRO43593 1189 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 RNASEH1O60930 286 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 SPAG7O75391 227 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ENDOD1O94919 500 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 GJB6O95452 261 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ASLP04424 464 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 PSMC2P35998 433 aaKnown RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 FYB2Q5VWT5 728 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 PAOXQ6QHF9 649 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ZNF783Q6ZMS7 281 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LRRC74BQ6ZQY2 392 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 DENND5BQ6ZUT9 1274 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 C17orf50Q8WW18 174 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 PRR11Q96HE9 360 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 ZNF419Q96HQ0 510 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 HSFY1Q96LI6 401 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 SLC2A13Q96QE2 648 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CENPOQ9BU64 300 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CHORDC1Q9UHD1 332 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-207ENST00000451834 CA14Q9ULX7 337 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 LRRK1Q38SD2 2015 aa8.13□□□□□ -1.11
CNOT4-207ENST00000451834 TMCC1O94876 653 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 FBXO21O94952 628 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 BAG2O95816 211 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 CDK4P11802 303 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 KRT13P13646 458 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 GDI1P31150 447 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 GNL1P36915 607 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 CPA2P48052 419 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 GRSF1Q12849 480 aaKnown RBP eCLIP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 SLC12A1Q13621 1099 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 PLK5Q496M5 336 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 EOGTQ5NDL2 527 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 NANOGNBQ7Z5D8 188 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 SPATA2LQ8IUW3 424 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 ZBTB8BQ8NAP8 495 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 ANKRD52Q8NB46 1076 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 SLC4A11Q8NBS3 891 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 CTNNBL1Q8WYA6 563 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 RFFLQ8WZ73 363 aa8.12□□□□□ -1.11
CNOT4-207ENST00000451834 LSM14BQ9BX40 385 aaKnown RBP8.12□□□□□ -1.11
CNOT4-207ENST00000451834 PITPNM3Q9BZ71 974 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms