RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 OR12D3Q9UGF7 316 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PSMD13Q9UNM6 376 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 RAP2CQ9Y3L5 183 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 NEMP2A6NFY4 417 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 ZBTB14O43829 449 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 APOA4P06727 396 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 MLNP12872 115 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 ETFBP38117 255 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PTPN9P43378 593 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 LIMK2P53671 638 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 MPP1Q00013 466 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 HFE2Q6ZVN8 426 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 UNC93AQ86WB7 457 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PDSS2Q86YH6 399 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 RTKNQ9BST9 563 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PIF1Q9H611 641 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
MSH6-204ENST00000445503 FAM95CA0A1B0GW59 222 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 HMX2A2RU54 273 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PFKMP08237 780 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 PTPN1P18031 435 aaKnown RBP12.07□□□□□ -0.48
MSH6-204ENST00000445503 GRM5P41594 1212 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 ERO1BQ86YB8 467 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 DENND6AQ8IWF6 608 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 ZNF786Q8N393 782 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 CYGBQ8WWM9 190 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 HSFY1Q96LI6 401 aa12.07□□□□□ -0.48
MSH6-204ENST00000445503 STN1Q9H668 368 aaKnown RBP12.07□□□□□ -0.48
MSH6-204ENST00000445503 UBA6A0AVT1 1052 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 CRABP2P29373 138 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ADRA1BP35368 520 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ARPP19P56211 112 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 NSUN2Q08J23 767 aaKnown RBP eCLIP12.06□□□□□ -0.48
MSH6-204ENST00000445503 TAZQ16635 292 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 MAPK15Q8TD08 544 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 RBM22Q9NW64 420 aaKnown RBP eCLIP12.06□□□□□ -0.48
MSH6-204ENST00000445503 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 EMCNQ9ULC0 261 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 KCNU1A8MYU2 1149 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 C9JVG2 144 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 UBDO15205 165 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 BUD23O43709 281 aaKnown RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 MT-CYBP00156 380 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 NPR3P17342 541 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 PTPN3P26045 913 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 PPARGP37231 505 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 FASTKQ14296 549 aaKnown RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 ZBTB49Q6ZSB9 765 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 HAUS8Q9BT25 410 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 CASTOR2A6NHX0 329 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 DPYSL4O14531 572 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 HNRNPRO43390 633 aaKnown RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 PLIN5Q00G26 463 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 STX5Q13190 355 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 INSCQ1MX18 579 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 PRAMEF19Q5SWL8 479 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 BTBD8Q5XKL5 378 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 NAPRTQ6XQN6 538 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 STRADAQ7RTN6 431 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ANKRD13AQ8IZ07 590 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 CXorf38Q8TB03 319 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 CNDP1Q96KN2 507 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 PCDHAC1Q9H158 963 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
MSH6-204ENST00000445503 FZD10Q9ULW2 581 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ZNF711Q9Y462 761 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 ATAD5Q96QE3 1844 aa12.06□□□□□ -0.48
MSH6-204ENST00000445503 SMIM28A0A1B0GU29 152 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 SRP72O76094 671 aaKnown RBP12.05□□□□□ -0.48
MSH6-204ENST00000445503 TNFAIP8O95379 198 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 HMBSP08397 361 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 GFAPP14136 432 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 PROZP22891 400 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 PSME3P61289 254 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 ZNF534Q76KX8 674 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 PBXIP1Q96AQ6 731 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 ZFP42Q96MM3 310 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 ZNF778Q96MU6 729 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 DCUN1D5Q9BTE7 237 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 PIGVQ9NUD9 493 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 COMMD3-BMI1R4GMX3 469 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 ZNF839A8K0R7 811 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 NR5A2O00482 541 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 MTSS1O43312 755 aa12.05□□□□□ -0.48
MSH6-204ENST00000445503 GMNNO75496 209 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms