RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 USP33Q8TEY7 942 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 ZNF419Q96HQ0 510 aaPredicted RBP14.39□□□□□ -0.11
NCLP1-201ENST00000445357 FUBP3Q96I24 572 aaKnown RBP eCLIP14.39□□□□□ -0.11
NCLP1-201ENST00000445357 VPS39Q96JC1 886 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 CAPNS2Q96L46 248 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 TBL1YQ9BQ87 522 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 UBP1Q9NZI7 540 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 SFMBT1Q9UHJ3 866 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 SCML2Q9UQR0 700 aa14.39□□□□□ -0.11
NCLP1-201ENST00000445357 A0A096LPK6 155 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 DDHD2O94830 711 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 LMNAP02545 664 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 GEMP55040 296 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 CLLU1OSQ5K130 101 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 PKN3Q6P5Z2 889 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 TEX9Q8N6V9 391 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 PTCD2Q8WV60 388 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 C8orf48Q96LL4 319 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 C1orf74Q96LT6 269 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ANKRD27Q96NW4 1050 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 GPR22Q99680 433 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 MRM3Q9HC36 420 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 IARS2Q9NSE4 1012 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ZNF358Q9NW07 568 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 DNAJC28Q9NX36 388 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 TAGLN3Q9UI15 199 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 E9PAM4 449 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 C2P06681 752 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 TPBGLP0DKB5 382 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 GNAZP19086 355 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ARRB2P32121 409 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ADRA1AP35348 466 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ABCE1P61221 599 aaKnown RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 FAM189BP81408 668 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 RABGAP1LQ5R372 815 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 SLC24A5Q71RS6 500 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 LCA5Q86VQ0 697 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 COLGALT2Q8IYK4 626 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 LINC01599Q8WXQ3 324 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 SLC39A13Q96H72 371 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 NUDCD1Q96RS6 583 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 EBF4Q9BQW3 602 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 RHOJQ9H4E5 214 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 NKX1-2Q9UD57 310 aaPredicted RBP14.38□□□□□ -0.11
NCLP1-201ENST00000445357 ANKRD6Q9Y2G4 727 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 PCDHB12Q9Y5F1 795 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 HS3ST4Q9Y661 456 aa14.38□□□□□ -0.11
NCLP1-201ENST00000445357 GREB1Q4ZG55 1949 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 G3V2L1 256 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 AOC2O75106 756 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
NCLP1-201ENST00000445357 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
NCLP1-201ENST00000445357 CKBP12277 381 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 MYL4P12829 197 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 GMPRP36959 345 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 TUBP50607 506 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ACLYP53396 1101 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 MLLT6P55198 1093 aaPredicted RBP14.37□□□□□ -0.11
NCLP1-201ENST00000445357 CAP1Q01518 475 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ITGA9Q13797 1035 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ANO4Q32M45 955 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 NOMO2Q5JPE7 1267 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 RFWD3Q6PCD5 774 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ATG14Q6ZNE5 492 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 MON1AQ86VX9 555 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ZC3HC1Q86WB0 502 aaKnown RBP14.37□□□□□ -0.11
NCLP1-201ENST00000445357 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 SCN4BQ8IWT1 228 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ARHGAP24Q8N264 748 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ARHGAP18Q8N392 663 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 NSMCE1Q8WV22 266 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 FATE1Q969F0 183 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 MCUR1Q96AQ8 359 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ATXN7L3BQ96GX2 97 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 RILPQ96NA2 401 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 OSER1Q9NX31 292 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 MID2Q9UJV3 735 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 TLR6Q9Y2C9 796 aa14.37□□□□□ -0.11
NCLP1-201ENST00000445357 TMEM114B3SHH9 223 aa14.36□□□□□ -0.11
NCLP1-201ENST00000445357 SPECC1L-ADORA2AF8WAN1 911 aa14.36□□□□□ -0.11
NCLP1-201ENST00000445357 ZNF195O14628 629 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms