RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 DRC7Q8IY82 874 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 CPA6Q8N4T0 437 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 TC2NQ8N9U0 490 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 PHC3Q8NDX5 983 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 GSTCDQ8NEC7 633 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 CACTINQ8WUQ7 758 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 SNRNP27Q8WVK2 155 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 RLN3Q8WXF3 142 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 CD101Q93033 1021 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 ZNF830Q96NB3 372 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 LRRC3BQ96PB8 259 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 ADPGKQ9BRR6 497 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 INTS2Q9H0H0 1204 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 RPF1Q9H9Y2 349 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 APOBEC3GQ9HC16 384 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 FBRSL1Q9HCM7 1045 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 TMEM8AQ9HCN3 771 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 PLCB1Q9NQ66 1216 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 TM7SF3Q9NS93 570 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 GCNT4Q9P109 453 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 CEP72Q9P209 647 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 IMPACTQ9P2X3 320 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 TJP2Q9UDY2 1190 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 AFF4Q9UHB7 1163 aaKnown RBP5.03□□□□□ -1.6
PTPN4-206ENST00000441089 SIX4Q9UIU6 781 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 MAN2B2Q9Y2E5 1009 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 COQ4Q9Y3A0 265 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 FHOD1Q9Y613 1164 aa5.03□□□□□ -1.6
PTPN4-206ENST00000441089 TP53BP1Q12888 1972 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ESPL1Q14674 2120 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 AKR1B15C9JRZ8 316 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 PTGESO14684 152 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 PPEF2O14830 753 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 P4HA2O15460 535 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MFAP3LO75121 409 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 B3GAT3O94766 335 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 IL18RAPO95256 599 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 SEC24AO95486 1093 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 HLA-DRAP01903 254 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TPM3P06753 285 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TPM2P07951 284 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 PNMA6AP0CW24 399 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MYF5P13349 255 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TNNI1P19237 187 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 IGFBP6P24592 240 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TKTP29401 623 aaKnown RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GJA4P35212 333 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ETV3P41162 512 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MATKP42679 507 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GRK6P43250 576 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 EPHB3P54753 998 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ARPP19P56211 112 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MYL6P60660 151 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 MRPS21P82921 87 aaKnown RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CCZ1BP86790 482 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CCZ1P86791 482 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 POU5F1Q01860 360 aaKnown RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 PDGFRLQ15198 375 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ZBTB6Q15916 424 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 EXOC3L4Q17RC7 722 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 INAVAQ3KP66 663 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TBC1D25Q3MII6 688 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 HSF5Q4G112 596 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CCDC157Q569K6 752 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 FIGNQ5HY92 759 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GLRA4Q5JXX5 417 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 WDR45BQ5MNZ6 344 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 KRT39Q6A163 491 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 SPOPLQ6IQ16 392 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 DHRS13Q6UX07 377 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 DBX2Q6ZNG2 339 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TRAPPC11Q7Z392 1133 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 WDR49Q8IV35 697 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 LRRC8AQ8IWT6 810 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 USP33Q8TEY7 942 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CPLX3Q8WVH0 158 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ANP32BQ92688 251 aaKnown RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 C18orf25Q96B23 403 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 KREMEN1Q96MU8 473 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ACAP3Q96P50 834 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 GCNAQ96QF7 691 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CCDC94Q9BW85 323 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 NAA15Q9BXJ9 866 aaKnown RBP5.02□□□□□ -1.61
PTPN4-206ENST00000441089 EBF3Q9H4W6 596 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ASB7Q9H672 318 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 KIF9Q9HAQ2 790 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CPNE5Q9HCH3 593 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 HPS4Q9NQG7 708 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CACNG4Q9UBN1 327 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 TUBGCP4Q9UGJ1 667 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 PYCARDQ9ULZ3 195 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 CAPN11Q9UMQ6 739 aa5.02□□□□□ -1.61
PTPN4-206ENST00000441089 ASB3Q9Y575 518 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms