RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MGAT3Q09327 533 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 PPP2R5DQ14738 602 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SWSAP1Q6NVH7 229 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 UNC5BQ8IZJ1 945 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 DLG3Q92796 817 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 MOCS1Q9NZB8 636 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 EPS15L1Q9UBC2 864 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CNOT11Q9UKZ1 510 aaKnown RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 CDY2AQ9Y6F7 541 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CDY1Q9Y6F8 540 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SQORQ9Y6N5 450 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CFLARO15519 480 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 H6PDO95479 791 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 IDO1P14902 403 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 FUT4P22083 530 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 EPHA3P29320 983 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CYP2C18P33260 490 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 MLH1P40692 756 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 STAT5BP51692 787 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ATXN3P54252 364 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 MYL6P60660 151 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CEACAM7Q14002 265 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 PPP6R3Q5H9R7 873 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 PPM1LQ5SGD2 360 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 METTL21CQ5VZV1 264 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SLFN12LQ6IEE8 588 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 XYLT1Q86Y38 959 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 LZTR1Q8N653 840 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SLC4A11Q8NBS3 891 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SLC35B4Q969S0 331 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 FERMT1Q9BQL6 677 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 OXCT2Q9BYC2 517 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ZNF302Q9NR11 478 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 TMEM216Q9P0N5 145 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 NLRC5Q86WI3 1866 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 C7orf72A4D263 438 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 RGSL1A5PLK6 1076 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 LDHAP00338 332 aaKnown RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 ZNF26P17031 533 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 GLDCP23378 1020 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 BMP8BP34820 402 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 NUMBP49757 651 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 NAA20P61599 178 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 TXNL4AP83876 142 aaKnown RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 GRIK4Q16099 956 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 MGAT5BQ3V5L5 792 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ELMSAN1Q6PJG2 1045 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 PLD5Q8N7P1 536 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ZNF781Q8N8C0 355 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 RDM1Q8NG50 284 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 MAPK15Q8TD08 544 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 TRPC4APQ8TEL6 797 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 PDCD6IPQ8WUM4 868 aaKnown RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 USP13Q92995 863 aaPredicted RBP8.72□□□□□ -1.01
HPS4-206ENST00000439453 KLHL32Q96NJ5 620 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 RNF157Q96PX1 679 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 OR52B2Q96RD2 323 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 RANBP9Q96S59 729 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 CAAP1Q9H8G2 361 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 HEY1Q9Y5J3 304 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ARHGEF37A1IGU5 675 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 H3BNH8 94 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 RNASEH2AO75792 299 aaKnown RBP8.71□□□□□ -1.01
HPS4-206ENST00000439453 MAP3K6O95382 1288 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 HSPA4LO95757 839 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 ERBB2P04626 1255 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 CCDC130P13994 396 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 INSRRP14616 1297 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 CD19P15391 556 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 ZFXP17010 805 aaPredicted RBP8.71□□□□□ -1.01
HPS4-206ENST00000439453 NELFEP18615 380 aaKnown RBP8.71□□□□□ -1.01
HPS4-206ENST00000439453 NRF1Q16656 503 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 PPM1JQ5JR12 505 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 SCARA5Q6ZMJ2 495 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 RNF148Q8N7C7 305 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 EME1Q96AY2 570 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 CPXM1Q96SM3 734 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 TCF7L2Q9NQB0 619 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 TMEM39AQ9NV64 488 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.01
HPS4-206ENST00000439453 MYRFQ9Y2G1 1151 aa8.71□□□□□ -1.01
HPS4-206ENST00000439453 FNDC1Q4ZHG4 1894 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 BCLAF3A2AJT9 711 aaKnown RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 C17orf102A2RUQ5 167 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 DGKIO75912 1065 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 BCAS2O75934 225 aaPredicted RBP8.71□□□□□ -1.02
HPS4-206ENST00000439453 C22orf31O95567 290 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 CKBP12277 381 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 MX2P20592 715 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 ME2P23368 584 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 PHKA2P46019 1235 aa8.71□□□□□ -1.02
HPS4-206ENST00000439453 CCR3P51677 355 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms