RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ABI3BPQ7Z7G0 1075 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 CLEC14AQ86T13 490 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 LURAP1LQ8IV03 231 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 CCAR2Q8N163 923 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 ZNF548Q8NEK5 533 aaPredicted RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 KLK6Q92876 244 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ALG14Q96F25 216 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 HSFY1Q96LI6 401 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 DUSP23Q9BVJ7 150 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 MIS12Q9H081 205 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ABCG4Q9H172 646 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 EVA1BQ9NVM1 165 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 IL17BQ9UHF5 180 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
RFFL-203ENST00000413582 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 COQ4Q9Y3A0 265 aa9.82□□□□□ -0.84
RFFL-203ENST00000413582 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 TCAF2A6NFQ2 919 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 NEMP2A6NFY4 417 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 F5H5T6 163 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 IGLV3-25P01717 112 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 CTSLP07711 333 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 EPB41P11171 864 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 TBXAS1P24557 533 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 BRD2P25440 801 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 HNRNPKP61978 463 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFFL-203ENST00000413582 DPYDQ12882 1025 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 ZNF177Q13360 481 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 CDKN3Q16667 212 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 ARL13BQ3SXY8 428 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 ZC3H12AQ5D1E8 599 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 ZNF542PQ5EBM4 170 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 DCAF17Q5H9S7 520 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 CAVIN1Q6NZI2 390 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 ZCCHC8Q6NZY4 707 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 NEK5Q6P3R8 708 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 TMEM270Q6UE05 265 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 CCDC81Q6ZN84 652 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 RBM44Q6ZP01 1051 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 PTAR1Q7Z6K3 402 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 HORMAD1Q86X24 394 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 EXD3Q8N9H8 876 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 OR52K2Q8NGK3 314 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 ERCC4Q92889 916 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 FAM149B1Q96BN6 582 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 GRAMD1AQ96CP6 724 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 BTN2A3PQ96KV6 586 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 PRMT1Q99873 361 aaKnown RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 CLSTN2Q9H4D0 955 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 DNAJC28Q9NX36 388 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 KIAA1257Q9ULG3 409 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 ATXN7L1Q9ULK2 861 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 HEMK1Q9Y5R4 338 aaPredicted RBP9.81□□□□□ -0.84
RFFL-203ENST00000413582 SCN8AQ9UQD0 1980 aa9.81□□□□□ -0.84
RFFL-203ENST00000413582 A6NNZ2 444 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 SART1O43290 800 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 TCEA3O75764 348 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 CALCAP01258 141 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 NME1P15531 152 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 RPL34P49207 117 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 IRAK1P51617 712 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 OXCT1P55809 520 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 PITX1P78337 314 aaPredicted RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 CENPCQ03188 943 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 LRMPQ12912 555 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 EIF4EBP2Q13542 120 aaPredicted RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 FZD2Q14332 565 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 DLG2Q15700 870 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 CNGA2Q16280 664 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 LINC00303Q3SY05 128 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 ACCSLQ4AC99 568 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 TCERG1LQ5VWI1 586 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 SYPL2Q5VXT5 272 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 SEL1L3Q68CR1 1132 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 OR6B2Q6IFH4 312 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 KYAT3Q6YP21 454 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 RBM43Q6ZSC3 357 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 Q6ZSR6 202 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 BEND5Q7L4P6 421 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 EFL1Q7Z2Z2 1120 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 SH2D3CQ8N5H7 860 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 ARRDC3Q96B67 414 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 CCNL2Q96S94 520 aaPredicted RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 FAM117AQ9C073 453 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 TMEM63CQ9P1W3 806 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 SLC25A13Q9UJS0 675 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 ZFR2Q9UPR6 939 aaKnown RBP9.8□□□□□ -0.84
RFFL-203ENST00000413582 OR51B4Q9Y5P0 310 aa9.8□□□□□ -0.84
RFFL-203ENST00000413582 CPED1A4D0V7 1026 aa9.79□□□□□ -0.84
RFFL-203ENST00000413582 EME2A4GXA9 379 aaPredicted RBP9.79□□□□□ -0.84
RFFL-203ENST00000413582 RNF225M0QZC1 329 aaPredicted RBP9.79□□□□□ -0.84
RFFL-203ENST00000413582 RNF103O00237 685 aa9.79□□□□□ -0.84
RFFL-203ENST00000413582 KPNA3O00505 521 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms