RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 GSRP00390 522 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 LMNAP02545 664 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 CCDC175P0C221 793 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ACADMP11310 421 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 TCF4P15884 667 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 OXTRP30559 389 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 HOXD12P35452 270 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 HSPA9P38646 679 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 FNTBP49356 437 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 COPS2P61201 443 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ARF5P84085 180 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ZNF33AQ06730 810 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 CCDC15Q0P6D6 951 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 DPYSL3Q14195 570 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 GRM3Q14832 879 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 PAFAH1B3Q15102 231 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 DLG2Q15700 870 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 C9orf64Q5T6V5 341 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 FAM46CQ5VWP2 391 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 LAIR1Q6GTX8 287 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 KIAA1211LQ6NV74 962 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 TSSK4Q6SA08 328 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 DAAM2Q86T65 1068 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ZSCAN30Q86W11 494 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 TMPRSS6Q8IU80 811 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 KATNAL2Q8IYT4 538 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ATP11CQ8NB49 1132 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 KCTD6Q8NC69 237 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ACRBPQ8NEB7 543 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 OR7D4Q8NG98 312 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 HMGB4Q8WW32 186 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 SORCS1Q8WY21 1168 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 OR8D1Q8WZ84 308 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 FATE1Q969F0 183 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 NKD2Q969F2 451 aaPredicted RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 SIPA1Q96FS4 1042 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 RBM41Q96IZ5 413 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 MKRN2Q9H000 416 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 KLC2Q9H0B6 622 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 NOL6Q9H6R4 1146 aaKnown RBP8.39□□□□□ -1.07
RPE-204ENST00000411934 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 HAUS2Q9NVX0 235 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 GPATCH2LQ9NWQ4 482 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 AMACRQ9UHK6 382 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 DNAI1Q9UI46 699 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 FZD4Q9ULV1 537 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 PCDHGA5Q9Y5G8 931 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 ADGRG1Q9Y653 693 aa8.39□□□□□ -1.07
RPE-204ENST00000411934 TTC34A8MYJ7 566 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 MIF4GDA9UHW6 222 aaKnown RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 WASH3PC4AMC7 463 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 SLC7A4O43246 635 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 SNAP91O60641 907 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PRAMEF11O60813 436 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 SIN3BO75182 1162 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 ZNF189O75820 626 aaPredicted RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 RHOBTB1O94844 696 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 DNTTP04053 509 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PRNPP04156 253 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 HLA-EP13747 358 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 MX2P20592 715 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 C5AR1P21730 350 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 COMTP21964 271 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 KDELR1P24390 212 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 IL4RP24394 825 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 CTNNA2P26232 953 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 CTNNA1P35221 906 aaKnown RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 PTPN7P35236 360 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PLA2G5P39877 138 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 WASP42768 502 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 SSR1P43307 286 aaKnown RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 MAPK8P45983 427 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 RECQLP46063 649 aaPredicted RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 STK19P49842 368 aaPredicted RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 TAS2R40P59535 323 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 SNRPD1P62314 119 aaKnown RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 IL10RBQ08334 325 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 ELF2Q15723 593 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 ODF2Q5BJF6 829 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 RALGPS1Q5JS13 557 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 DAB2IPQ5VWQ8 1189 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PMS2CLQ68D20 193 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 TXNRD3NBQ6F5E7 133 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 TIGD7Q6NT04 549 aaPredicted RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
RPE-204ENST00000411934 RABEPKQ7Z6M1 372 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 ARHGAP12Q8IWW6 846 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 LRRC57Q8N9N7 239 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 TMIEQ8NEW7 156 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 PPP1R16AQ96I34 528 aa8.38□□□□□ -1.07
RPE-204ENST00000411934 RPL10LQ96L21 214 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms